KEGG   Duncaniella sp. B8: FDZ78_05910
Entry
FDZ78_05910       CDS       T05963                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
dun  Duncaniella sp. B8
Pathway
dun03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dun00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FDZ78_05910 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dun03019]
    FDZ78_05910 (rny)
Messenger RNA biogenesis [BR:dun03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     FDZ78_05910 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B Neur_chan_memb KH_2 PFF1_TM Cas3_HD DUF4686
Other DBs
NCBI-ProteinID: QCP72138
UniProt: A0AAE6BVQ1
LinkDB
Position
1339778..1341319
AA seq 513 aa
MDILFYICAALIGAAIGIVIMVAVQRSTARSRAKTIIDDANREAEVIMKDKLLEAREQEL
RIKTEAEKQANQRLQRIQSEESKLKQRQTQLNQQQSENARARNENEQTRQNLEAQLAVVD
QRKEELDRLRRTAQDTLEHISGLSSEEAKEKLIESLKDEAKTAASAYINDIMDEAKMTAN
KEAKRIVVQSIQRLATETAIENSVTVFHIDSDEIKGRIIGREGRNIRALEAATGIEIIVD
DTPEAIVLSGFDPVRREIARLALHQLVADGRIHPARIEEVVAKVRKQIEEEIIETGKRTA
IDLGIHGLHPDLIRMVGKMKYRSSYGQNLLQHSRETANLCAIMAAELGLNPKKARRAGLL
HDIGKVPDEEPELPHALLGMKLAEKYKEKPEICNAIGAHHDEIEQTSLLAPIVQVCDAIS
GARPGARREIVEAYIKRLNDLEQLALSYPGVIKTYAIQAGRELRVIVGADKIDDVETEKL
SSEIARRIQDEMTYPGQVKITVIRETRSVSFAK
NT seq 1542 nt   +upstreamnt  +downstreamnt
atggatatattattctacatctgcgccgccctcataggggccgccatcggaatagtgatc
atggtagccgtccagcgatcaaccgcccgctcgcgcgccaaaacgataatcgacgatgcc
aaccgcgaggcagaagtgatcatgaaagacaaacttctcgaagcccgcgaacaggaactc
cgcatcaagaccgaagccgaaaagcaagcaaatcagcgcttgcagcgcatccagagcgaa
gagtcgaaactcaaacagcgccagactcagctcaaccagcagcagagcgaaaacgcccgc
gccagaaacgaaaacgagcagacccgccagaatctcgaagcccagctcgccgtggtcgac
cagcgcaaggaagaactcgaccgcctgcgccgcaccgcccaggacaccctcgaacacatc
tcaggactctcaagcgaagaagccaaggaaaagctcatcgaatcgctcaaggacgaagcc
aagacagccgcaagcgcctacatcaacgacatcatggacgaagccaagatgacggccaac
aaggaagcaaagcgcatcgtggtccagtcaatccagcgcctcgccacagagaccgccatt
gaaaactccgtgacagtcttccacatcgacagcgacgagatcaaaggccgcatcataggc
cgcgaaggccgcaacatccgcgccctcgaagccgcgacagggatcgaaatcatcgtcgat
gacacccctgaagccatagtgctctcaggcttcgaccccgtgcgacgcgagatagcacgc
ctcgccctccatcagctcgtggccgacggccgcatccaccccgcccgcatcgaggaagtt
gtggccaaagtgcgcaaacagatcgaggaagagatcatcgaaaccggcaagcgcacagcc
attgacctcggcatccacggcctccaccccgacctcatccgcatggtcggaaaaatgaaa
taccgctcaagctacggacagaacctcctgcagcactcgcgcgagaccgcaaacctctgc
gccatcatggccgccgagctcggactcaaccccaagaaagcccgtcgcgcaggcctgctc
cacgacataggcaaagtgcccgacgaagagcccgaactgccccacgcactcctcggcatg
aaactcgccgagaaatacaaggaaaaacctgagatctgcaacgccatcggcgcccaccac
gacgaaatcgaacagacctcgctcctggcccccatcgtccaggtctgcgacgcaatctca
ggcgcacgtcccggcgcccgccgcgagattgtcgaagcctatatcaagcgtctcaacgac
ctcgaacagctcgccctcagctatcccggcgtgatcaagacctacgccatccaggccggc
cgcgaactgcgcgtgattgtcggagccgacaagatcgacgacgtcgagaccgaaaagctc
tcatcggaaatcgcccgccgcatccaggacgaaatgacatatcccggacaggtcaaaatc
accgtaatccgcgagacccgctccgtaagcttcgccaagtaa

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