KEGG   Duncaniella sp. B8: FDZ78_07615
Entry
FDZ78_07615       CDS       T05963                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
dun  Duncaniella sp. B8
Pathway
dun03410  Base excision repair
dun03430  Mismatch repair
dun03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dun00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    FDZ78_07615 (recJ)
   03430 Mismatch repair
    FDZ78_07615 (recJ)
   03440 Homologous recombination
    FDZ78_07615 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dun03400]
    FDZ78_07615 (recJ)
DNA repair and recombination proteins [BR:dun03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     FDZ78_07615 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     FDZ78_07615 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      FDZ78_07615 (recJ)
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1 Syntaxin-5_N
Other DBs
NCBI-ProteinID: QCP72446
LinkDB
Position
complement(1762519..1764240)
AA seq 573 aa
MTSKWNYCPLTSDEQQVESDLAKSYAGVPPVSELLVQRGISSVREAEKFFHPSLKDLHDP
FLMPDMDKAVHRLNRAMGAKEQIMVYGDYDVDGTTAVALVYKYLRNFYSHIDYYIPTRNE
DGYGISKATIDMAARQGVKLFIILDCGIKATEEIEYARSLGIDFIICDHHVPDEKLPPAV
AILNPKLDGSTYPCPHLSGCGVGYKLMQAFAISNGLGNTELEGLLDLVAVSIAADIVPMV
GENRILTYHGLKRLNSNPNMGLRAIIRICGLGNREITISDVIFKIGPRINASGRMQSGKE
AVDLLVARDVADAYTRAKEIDRYNQDRKELDKQITEEANTILEERGEMTSDQKSIVIYNK
NWHKGIIGIVASRLTELYYKPSVVLTYSNGLATGSSRSVQGFDVYKAVESVRDLLENFGG
HTYAVGLSLKEENIAEFTRRFEQFVSDNIRPDQLTPQLDIDAYLTFAEITPEFLSLLKQF
NPFGPGNSKPVFCTRGVTDFGTSKLVGRHSEHIKLELVDSTCGKVMNGIVFNSAASFDHI
HSGKPFSICYTIEENKHKGGSAIQLFVKEIHPE
NT seq 1722 nt   +upstreamnt  +downstreamnt
atgacaagtaaatggaattactgtccccttacatccgacgaacaacaagtggagtccgac
ctggccaaaagctatgccggagtgccgcccgttagcgagctgcttgtgcaacggggcatt
tcctcggtcagagaggcggagaaatttttccacccctcgctgaaggatctgcatgacccg
tttctcatgcccgacatggacaaggccgtccaccggctaaaccgtgctatgggggctaag
gagcagattatggtctacggtgactatgatgtagacggaaccacagcagtggccctcgtc
tacaaatatctccgtaacttctactcccatatcgactactatatcccgacgcgcaacgaa
gacggatatggcatctcgaaagccaccatcgacatggccgcccgtcaaggggtcaaactt
tttatcatcctcgattgcggaatcaaagcaaccgaagagatcgagtatgcccgttctctg
ggcatagactttattatctgcgaccatcatgtgcccgacgagaaactcccgccggcggtt
gccatcctcaacccgaaactggatgggagcacctatccatgtccccacctctcaggctgc
ggcgtgggctataagctcatgcaggctttcgccatatcaaacggactgggcaacaccgaa
ctggaagggcttctcgacctcgtggctgtgtcaatcgccgcagacatcgtaccgatggta
ggcgaaaaccgcatcctcacataccacggactcaaaaggctcaactccaaccccaacatg
gggctgagagccataatccgtatctgcggcctcggaaaccgagaaatcacaatcagcgac
gtcatcttcaagatcggcccgcgcatcaacgcctccggacgcatgcagagcggaaaggaa
gccgttgacctgctcgtggcccgcgatgtggccgatgcctacacccgcgcaaaggagata
gaccgctacaaccaggaccgcaaggaactcgacaaacagataaccgaggaagccaatacg
attctcgaagagcgcggagagatgacctcagaccagaagtcgatagtaatctacaacaaa
aactggcacaagggcatcatcggcatcgtagcctcgcgactgaccgagctctactacaag
ccatcggtggtcctcacctactccaacggactggccacaggctcatcgcgctcggtgcag
ggcttcgacgtctacaaagccgtggaatcagtgcgcgacctgcttgagaacttcggcggc
cacacctacgccgtaggcctctcgctcaaggaagagaacatagcggagttcacacgccgt
ttcgagcagtttgtcagcgacaacatacgccccgaccagctaaccccccagctcgatatc
gacgcctacctgacattcgccgagatcacccccgaattcctatccctgctcaaacagttc
aaccccttcggtccgggcaacagcaaaccggtgttctgtacacgcggagtgactgacttc
ggcacctcgaaactcgtagggcgccacagcgagcacataaaactcgaactcgttgacagc
acctgcggaaaagtcatgaacggcatagtcttcaacagcgccgccagcttcgaccacatc
cattcgggcaaacccttcagcatctgctacaccatcgaggaaaacaaacacaagggaggt
tccgccatacagctcttcgtcaaggaaatccatcccgaatag

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