Duncaniella sp. B8: FDZ78_09815
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Entry
FDZ78_09815 CDS
T05963
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dun
Duncaniella sp. B8
Pathway
dun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FDZ78_09815 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dun03019
]
FDZ78_09815 (pnp)
03016 Transfer RNA biogenesis [BR:
dun03016
]
FDZ78_09815 (pnp)
Enzymes [BR:
dun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FDZ78_09815 (pnp)
Messenger RNA biogenesis [BR:
dun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FDZ78_09815 (pnp)
Transfer RNA biogenesis [BR:
dun03016
]
Prokaryotic type
tRNA degradation factors
FDZ78_09815 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
Motif
Other DBs
NCBI-ProteinID:
QCP72826
LinkDB
All DBs
Position
complement(2297680..2299947)
Genome browser
AA seq
755 aa
AA seq
DB search
MNPIKKTIALPDGRTITLETGKLAKQADGAVELRMGNTMLLATVVTAKEAGEGVDFMPLQ
VEYKEKFSSNGRFPGGFLKREGRASDYEILTSRLVDRVLRPLFPDNYHADTFVQVTMYSS
DGVDMPDALAGLAASAAIAVSDIPFNGPISEVRVARVNGEFVIDPTFEQLEKADMELMVG
ATYDNIMMVEGEMNEVSEADLLAALRAAHDAIKVQCKAQMELAEEVGSTVKREYCHETND
EDLRKDVHDKCYDKAYAVAKAGCADKHWRQESFEKICEEYLESLPEEERDEKTAMVKRYY
HDVEKEAMRRCVLDEGIRLDGRKTTEIRPIWCEVDYLPGPHGSAVFTRGETQSLATVTLG
TKLDEKILDDVLNQGRERFLLHYNFPPFSTGEARPVRGVGRREVGHGNLAHRALKRMFPD
DFPYVCRIVSDILESNGSSSMATVCAGTLSLLDAGVKMKRPVSGIAMGLISDGTKYAVLS
DILGDEDHLGDMDFKVTGTREGITATQMDIKCDGLSYEILEKALNQAKEGRLHILDKIEE
TIPAAREDYKAHVPRIVTMLIPKELIGAVIGPGGKIIQGIQEASGATVSIDEIPDGGYIE
VAASNKASIDKALDMINAIVELPEEGKVYHGKVRSILDFGAFVEFMPNRDGLLHISEISW
DRLENMEAAGLKEGDELEVKLIEIDKKTGKYRLSMRALQPKPEGYVERERAPRGERGLRR
EGDRPRRDGDRGPRRDGDRGPRRENNGGNHGAPRN
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaatcaaaaaaaccatcgcgctgcctgacggtcgcaccatcaccctggagacc
ggcaaacttgcaaagcaggccgatggagcggtagaactgcgcatgggcaacactatgctc
cttgcgacagtagtaacggccaaagaggccggagagggcgtagatttcatgcccctccaa
gttgagtataaagaaaaattctcctctaacggacgtttccccggcggcttcctcaagcgt
gaaggccgcgcaagcgactacgagatcctgacatcgcgtctggttgaccgtgtgctccgc
ccacttttccctgacaattaccacgccgacactttcgtacaggttacaatgtattcttcc
gacggtgtcgacatgcccgacgctcttgccggcctcgccgcttcggcagccatcgcagtg
agcgacatacccttcaacggtcctatctcggaagtccgagtggcccgtgtaaacggcgaa
ttcgtaatcgaccccactttcgaacagcttgagaaagccgacatggagctcatggtcggt
gccacctatgacaacatcatgatggtggaaggcgaaatgaacgaagtatcagaagcagat
cttctcgcagcgctccgcgccgcccatgacgccatcaaggttcagtgcaaggcccagatg
gaacttgccgaggaagttggttcgaccgtaaaacgcgaatattgccacgagaccaatgac
gaagatctccgcaaggacgtacatgacaagtgctacgacaaggcatatgcagtggccaag
gccggctgcgccgacaagcactggcgtcaggaaagcttcgaaaagatctgcgaagaatat
ctcgaatcactccccgaagaagaacgcgatgaaaagaccgctatggtcaagcgctactac
cacgatgtggaaaaagaagccatgcgccgctgcgttcttgacgaaggcatccgtctcgat
ggccgcaagaccaccgagatccgcccgatctggtgtgaggtagactatctgcccggacct
cacggatcagccgtgttcacccgtggcgagacccagtcgctcgccacagtaaccctcgga
accaagctcgacgagaagatcctcgacgacgttctcaaccagggccgcgaacgcttcctc
ctccactataacttcccgcccttctccaccggcgaagcccgtccggtgcgtggcgtaggc
cgtcgtgaagtaggccacggcaatctcgcccaccgtgctctcaagcgcatgttccccgat
gatttcccctatgtatgccgcattgtcagcgacatcctcgaatcaaacggatcatcgtca
atggcaactgtctgcgcaggcaccctctcgctgctcgacgcaggtgtgaagatgaaacgc
cctgtcagcggtatcgctatgggtctcatctctgacggaacaaaatatgcagtcctctct
gacattctcggtgacgaagaccacctcggcgacatggacttcaaagtgaccggtacccgc
gaaggtatcaccgccacccagatggacatcaagtgcgacggcctgagctacgaaatcctt
gaaaaggccctcaaccaggccaaggaaggacgtctgcacatcctcgacaagatcgaagag
acaatccccgcagcccgcgaggactacaaggcacacgtgccccgcatcgtcaccatgctc
atccccaaagagcttatcggtgcagtgatcggccccggcggaaagatcatccagggaatc
caggaagcaagcggcgcaaccgtaagcatcgacgaaatccccgacggaggctacatcgaa
gtcgctgcctctaacaaggcttcgatcgacaaggctctcgatatgatcaacgctatcgtc
gaactccccgaagagggaaaggtttaccacggcaaagtgcgttctatccttgacttcggc
gcattcgttgaattcatgcccaaccgcgacggtctgctccacatctcggaaatctcatgg
gaccgcctcgaaaacatggaagccgctggcctcaaggaaggcgacgagctcgaagtgaaa
ctcatcgagatcgacaagaagaccggcaaataccgcctgtcaatgcgcgcgctccagccc
aaacccgaaggctacgtagagcgtgaacgcgcaccccgtggcgaacgcggactgcgccgc
gaaggcgaccgtccccgtcgtgacggagatcgcggtccacgccgtgacggcgaccgtggc
ccacgccgcgaaaacaatggcggcaaccacggcgcaccccgtaactaa
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