Duncaniella sp. B8: FDZ78_10125
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Entry
FDZ78_10125 CDS
T05963
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
dun
Duncaniella sp. B8
Pathway
dun03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FDZ78_10125 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dun03400
]
FDZ78_10125 (uvrB)
DNA repair and recombination proteins [BR:
dun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FDZ78_10125 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FDZ78_10125 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
AAA_30
UVR
UB2H
Kinesin
AAA_22
SLFN-g3_helicase
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
QCP72881
UniProt:
A0AAE6BXW1
LinkDB
All DBs
Position
complement(2376484..2378580)
Genome browser
AA seq
698 aa
AA seq
DB search
MDFQLTSQYQPTGDQPQAIEQLVAGIRAGEKAQTLLGVTGSGKTFTMANVIEQVGKPTLI
LSHNKTLAAQLYSEFKGFFPNNSVQYFVSYYDYYQPEAYIPTVDKYIEKDLMINDEIEKL
RLSTVSALLSGRKDVVVVSSVSCLYGMGNPEDFDSNVVTVKVGQKITRNKFLRSLVNSLY
SRNELELSRGTFRVKGDTVDIRLAYEEIIVRVTFWGDEIESIKTLHPSDNVSLGTHDIFQ
IYPANLFVTSPERMGSAIGQIELDLGEQYNYFMREAKELEAKRLMERVTYDVEMLREVGH
CSGIENYSRYFDGRQPGMRPFCLLDYFPQDFLTIIDESHVTLPQCRAMYGGDLSRKMNLV
EYGFRLPAALDNRPLKFEEFERLTPQVLYVSATPADYELEKCEGVVVEQIIRPTGLLDPV
IEVRPSLNQIDDLLHEINLRIERDERVLVTTLTKRMAEELNDYLTKIRIKTAYIHSDVDT
LDRIRILDGLRAGEFDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRSHRSLTQTVGRA
ARNLNGTVIMYADKITDSMQQTIDETSRRRAMQLAYNEEHGITPQAIIKARNSIIGLEAD
ADETADSSRGKQPSRRESTSKTGRAKSIPYAEEYSTKVNLAADPVIPYLNADALQKLITT
KRLEMVEAARRMDFIDAARLRDEVLAMEERLAKMSAEP
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggatttccagcttacatcacaatatcagcccacgggcgaccagccgcaagcaatcgaa
cagctcgtggcaggcatcagggcgggtgagaaagcccagacgcttctcggtgtcacaggc
tcaggcaaaacattcacgatggccaacgtcatcgagcaggttggaaagccgaccctcatc
ctcagccacaacaagactctcgccgcacagctttacagcgagttcaaaggattcttcccg
aacaactcggtgcagtattttgtctcctactacgattactatcagccggaggcctatata
cccactgtcgacaaatacatagaaaaagatctcatgatcaacgacgagatcgaaaaactg
cgactgtcgaccgtctcggcactcctgtcagggcgcaaggacgtggttgtggtctcttca
gtgtcatgcctctacggcatgggcaaccccgaagacttcgacagcaatgtggtgactgtg
aaagtcggacagaaaatcacacgcaacaaattcctgcggtcgctcgtcaattcgctctac
tcgcgcaacgagctggaactgtcgcgtggcacattccgtgtcaaaggcgacaccgttgac
attcggctcgcttatgaagaaattattgtgcgcgtcaccttctggggcgatgagatcgag
tcgatcaagaccctccacccgtctgacaatgtctcgctcggcactcacgacatattccag
atctaccccgccaatctctttgtcacatcgcccgaacgcatgggctcggcaataggtcag
atcgaacttgacctcggcgagcaatacaactacttcatgcgcgaggccaaggaacttgaa
gccaaacgtctgatggaacgtgtcacctacgacgtcgagatgctgcgcgaagtgggccac
tgttcaggaatcgaaaactacagccgctacttcgacggccgtcagccgggcatgcgtccc
ttctgtctcctcgactatttcccccaggactttctgaccatcattgacgagagccacgtc
actctgccgcaatgccgcgccatgtatggcggcgacctctcgcgcaagatgaatcttgtg
gaatatggcttccgtctgcctgcggcgcttgacaaccgtccgctgaaattcgaggaattc
gaacgcctgactcctcaggtgctctacgtcagcgcaacgccggccgactatgagctggag
aaatgcgaaggcgtggtagtggaacagatcatccgccccaccggtctgctcgaccccgtg
atagaagtgcgcccgtcactcaaccagatcgacgaccttctccatgagataaatctgcgc
atcgagcgtgacgaacgcgtgttggtcaccaccctgaccaagcgcatggccgaggagctg
aacgactatctgacaaagatccgcataaagacagcctacatccacagcgatgtcgacacc
cttgaccgcatcaggattctcgacgggctgcgggccggcgaattcgatgtgcttgtcggc
gtgaacctcctccgcgaaggcctcgacctgccggaagtatcgcttgtggccatactcgat
gccgacaaggaaggcttcctgcgcagccacagatctctgacgcagactgtcggacgtgcg
gcccgaaacctcaacggcactgtcataatgtatgccgacaagattaccgactccatgcag
cagaccatcgacgagacgtcgcgccgccgcgcaatgcagcttgcctacaatgaagagcac
ggcataaccccgcaggccatcatcaaagcccgcaactcgatcatcggccttgaagccgat
gccgacgaaacagctgacagcagccgcggcaagcagccgtcacgccgggaaagcacatca
aagaccggacgggcaaaatccataccctatgccgaggaatacagcacaaaggtcaatctc
gctgccgatccggtaatcccctacctcaacgccgatgcgctgcagaagctcatcaccacc
aagcgtctcgaaatggtcgaggctgccagacgcatggacttcatcgatgccgcccgcctg
cgcgacgaggtcctcgctatggaggagcgccttgcaaaaatgtcagctgaaccgtag
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