Duncaniella sp. B8: FDZ78_10190
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Entry
FDZ78_10190 CDS
T05963
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
dun
Duncaniella sp. B8
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
LysM2_CERK1_LYK3_4_5
LysM3_LYK4_5
DUF6382
Motif
Other DBs
NCBI-ProteinID:
QCP72893
UniProt:
A0AAE6BYP3
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Position
2398620..2400461
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AA seq
613 aa
AA seq
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MKFRRLTISALCSLALAAGITADAAVKDLPVKEINGRSYHYYTVENKETIYSLCHKFGIS
KDELVKFNPSVADGLKSGSMLFFPVEESEVLTPDNANRHGVRMLSHTVAKGETIYGIAKK
YGISTDALIEQNPIVREGLKAGQTLHLTAPVIGEDNSAASAVAVGSASQGTTVIRTAPEG
YIVKKKETFYSIANAHGITVEQLEAANPGITVLKEGQVLSIPAPQGAVAAEQQASPSGLI
PVGTDGTVSVDDLARASGVTPEAKEELSVAVVLPFMLKEETPSKSAQRYTEFYKGFLIAV
DSMRHNGVPVKVTAYDTEGSTAKVRQLTSDSTLKAHRMIIAPDSSDQLAILGEFGRDNGI
KVLNAFIVRDECYQTNPAVMQGNIPSQQMIDKAAEAIAGRLAYSTPVFVSLADGANADKS
DFISALKSRIESKGIEWKTITAEAKLTPADLKSLKSDGNYTFIPLSARQSDLNRIMPAVI
EWRDEAGLPMVKLVGYPEWVTFRGETLQNMHNLNTTVYSRFFVDDDNVRTRRMEDRFKGW
YGAGMENAIPRQGLLGFDTGMFVLDYLKNPVARYDGVQNGYSFTTPEGAEGQCNNVLYLI
NFRTGGLIEKINL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttcgtagactgaccatatctgccctctgttctcttgcattggctgcaggcatt
acggctgacgccgcagtgaaagatctgcctgtcaaagagataaacggacgttcatatcat
tattataccgtagagaacaaggagaccatttattctctctgccataagttcggcatcagc
aaagacgagcttgtgaagtttaacccctcagtggccgacggactgaagtccggctcgatg
ctgttcttcccggttgaagagagcgaggtgctgactcctgacaatgccaaccgtcacgga
gtgcgtatgctgagccataccgtggcaaaaggggagactatctatggaatcgctaaaaaa
tacggaataagcacagatgcgctgatcgagcagaaccccattgtccgcgaagggctgaag
gctggtcagactcttcatctgacagcgccggttatcggcgaagataattcagcggccagt
gcagtggctgtcggatcagcctcgcaaggcactactgttattcgcacagcacctgaaggc
tatatagtaaagaagaaagagacgttttattctatagccaatgcccacgggatcaccgtg
gagcagcttgaagccgccaatccgggtattacggtcctgaaagaaggtcaggtgctgagc
attccggccccgcagggagcagtagcggcagagcagcaggcatctccttccggccttatt
ccggtcggaactgacggcaccgtatccgttgatgaccttgcccgtgcatccggtgtcact
ccggaggcaaaagaggagctttctgtagctgtggtcttgccgtttatgctcaaggaagaa
acaccgtcaaagagcgcgcagcgctacactgaattctataaaggatttctgattgccgta
gacagtatgcgccacaatggagtcccggtcaaagtaactgcctatgacactgaagggtct
acagcgaaagtccgtcagctgacttctgacagcaccttgaaagctcatcgcatgataata
gcccccgattcgtcagaccagctggctatactcggtgaattcgggcgtgataacggcata
aaagtgctcaacgcttttatagtccgcgatgaatgctatcagactaatcctgccgtgatg
cagggaaacataccttcgcagcaaatgattgacaaagccgccgaagcaattgccggacgg
ctggcatattcaacccccgtctttgtatctctggcagacggcgcgaatgcagacaaatct
gattttatctcggcgctcaaatcgcgtattgagtcaaaaggaattgagtggaagaccatt
acagccgaggcgaaactgactccggctgatcttaaaagcctgaagtctgacgggaactat
acgtttataccactgtcggcccgtcagagtgatctcaaccgcataatgcccgctgtcata
gagtggcgcgacgaggccggactcccgatggtcaagcttgtcggctatccggagtgggtg
acattccgcggcgagactctgcagaacatgcacaatctcaacaccacggtgtattcgcgt
ttctttgtcgatgatgacaatgtgcgcacacgtcgcatggaagaccgtttcaaaggctgg
tatggagccggaatggaaaatgccataccgcgtcagggactgctcggtttcgatacaggc
atgtttgtgctggattatctcaagaacccggtggcacgctatgacggtgtgcagaacggc
tattcgttcacaaccccggaaggagccgagggacagtgcaacaatgtgctctatctgatc
aacttccgcaccggcggtttaattgaaaaaatcaatctctga
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