Duncaniella sp. B8: FDZ78_10880
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Entry
FDZ78_10880 CDS
T05963
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
dun
Duncaniella sp. B8
Pathway
dun00521
Streptomycin biosynthesis
dun00523
Polyketide sugar unit biosynthesis
dun00541
Biosynthesis of various nucleotide sugars
dun01100
Metabolic pathways
dun01110
Biosynthesis of secondary metabolites
dun01250
Biosynthesis of nucleotide sugars
Module
dun_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
dun00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FDZ78_10880 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FDZ78_10880 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FDZ78_10880 (rfbC)
Enzymes [BR:
dun01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FDZ78_10880 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QCP73015
UniProt:
A0AAE6C0D6
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Position
complement(2573732..2574310)
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AA seq
192 aa
AA seq
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MEVIKTDIEGVVIIEPRIFADSRGYFFESYSKKEFDEKVRPVDFVQDNESCSSYGVMRGL
HFQAPPFTQSKLVRCVKGRVLDVAVDIRKGSPTYGRHVAVELSEDNHRQFFVPRGFAHGF
AVLSDIAVFQYKCDNYYAPQADGGISILDTSLGIDWLIEPGKAILSEKDMRHPMLSDFDS
PFDYHTDLYFAD
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgatcaagaccgatatcgaaggcgtggtgataatcgagccccgcatcttcgcc
gactcacgaggatattttttcgaaagctattcaaagaaagaattcgatgaaaaagtgcgc
cctgtggattttgtgcaggataatgaaagctgctcatcctacggagtaatgcgcggactc
cattttcaggctccgccgttcacgcagtcaaagcttgtgcgctgcgtcaaaggccgtgtg
cttgacgtggccgttgacatccgcaaaggctccccgacctatggccgccacgtggcggtc
gagctgtcggaagacaatcaccgtcagtttttcgtgccccgcggtttcgcccacggtttc
gccgtgctctccgacatcgccgtcttccagtataaatgtgacaactactacgccccgcag
gccgacggcggaatatcgattcttgatacatcgctcggcatcgactggctcatcgagccc
ggcaaggccattctcagcgagaaagacatgcgtcacccgatgctcagtgacttcgactcc
ccgtttgactatcacacagatctctattttgcggactga
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