Duncaniella sp. B8: FDZ78_10890
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Entry
FDZ78_10890 CDS
T05963
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
dun
Duncaniella sp. B8
Brite
KEGG Orthology (KO) [BR:
dun00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dun02000
]
FDZ78_10890
Transporters [BR:
dun02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FDZ78_10890
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
SusD-like
TPR_1
TPR_2
Motif
Other DBs
NCBI-ProteinID:
QCP73017
UniProt:
A0AAE6BYB4
LinkDB
All DBs
Position
complement(2575498..2577246)
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AA seq
582 aa
AA seq
DB search
MTHNFKLKYLAGITLAAAALCSCESLDYTPGDQMSGQNFWQTEDHARQAAIGMYAAMKST
WCFGLEFTFDMCSDLADGTSPWADISRGTSFASNSSGVQNHWQYLYELVHRSNTVIRNVA
TMPISATTIDRVTGEAKFLRAMAYFRMLNCWGGVPYYDESCDINEQFAHLDAPRSSAEEI
RQHIIDDLTEAIAKLPVSWDAENLGRATKGAAYALRGKVYLFDRQWDKAIADFEEIVYNK
SENYGYSLHPDYNELFRLYNGSHSPEMIFSIQSIDGNTAGYALDIVSYFGNKSTMRLIAG
NAIVPSTTLVDMYENLDGSPFDWDDLFPGFNNGGSDLRKSYMRVAIDQASTMVTSTLDCD
TSKVMDAYRLRDPRLCLNVITPYSHYLGTDAGSNPMDKQFVLADPSNGGAPMEAMAFIRN
SEGWNSYFWRKWIPTGNLDGYWGEYNRTPYEFPLLRLGDVLLMLAEAYNESGATDKAIVE
VNKVRARVGMPGLDRGPAWLAVGSKEEMAERIRRERAFELAGEGQRYWDLRRWGLLEESV
KDATDIFGDLMYTRSYQPRHELWPIPLVEMERNLNLTQNPGW
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgacacacaattttaagctgaaatatctcgcaggaatcaccctcgcagcagccgcgctc
tgcagctgcgaaagccttgattatacacccggcgaccagatgtcgggacagaatttctgg
cagaccgaagaccatgcccggcaggcagccatcggaatgtatgccgcaatgaaatccaca
tggtgcttcggactggagttcacatttgacatgtgcagtgatctggctgacggcacaagc
ccctgggccgatatttcgcgcggcacatcgttcgcctcaaacagctcaggagtacagaat
cactggcagtatctctatgaactcgtccaccgctccaacacagtaatccgcaacgtggcc
acaatgcctatcagcgccacaaccatcgatcgcgtcaccggagaggccaaatttctccgt
gctatggcctatttccgaatgctcaactgctggggtggagtgccatattatgacgaaagc
tgtgacattaacgaacagtttgcccaccttgacgccccgcgcagttcggcagaagaaatc
agacaacatataatcgacgatctgaccgaagccatcgccaaactgccggtaagctgggat
gccgagaatctcggacgcgccaccaagggtgcggcctacgctttgcgaggcaaagtctac
ctcttcgaccgccagtgggacaaggcaattgcagacttcgaggagattgtctacaacaag
tccgaaaactacggctattcgcttcatcccgactacaatgaactgtttcgcctctataac
ggcagccatagtcccgaaatgatcttctcgatccagtcgatcgacggcaacaccgccggc
tacgctcttgacatagtgtcttatttcggcaacaaatccaccatgcgcctaattgcaggc
aatgccatcgtaccctcgaccacactcgttgatatgtatgaaaatctcgatggatctccc
tttgactgggacgatctgtttccggggttcaacaacggcggctccgacctgcgcaaaagc
tacatgcgagtagccatagaccaggccagcacaatggtcacaagcactcttgactgcgac
acatcgaaagtcatggacgcataccgtctgcgcgatccgcgtctgtgtctgaacgtaatc
accccatactcccactatctgggcacggatgccggatcaaatccgatggataagcagttt
gtgcttgccgatccctccaatggcggtgctccgatggaagctatggcattcatacgcaac
tccgaaggatggaattcatacttctggcgcaaatggataccgacaggcaatctcgacggc
tattggggagaatacaaccgcacaccctatgaattccccttgctgcgcctcggcgatgtg
ctgctgatgctggctgaggcttacaatgaaagcggagctacagacaaggccatagtcgaa
gtcaacaaagtgcgcgcccgcgtaggtatgcccggccttgacagaggtccggcatggctt
gccgtaggcagcaaagaggaaatggctgaaagaatccggagagaacgcgccttcgaactc
gccggtgaaggccagcgttactgggacctccgccgctggggactgcttgaagaatcggtg
aaggatgccactgatattttcggtgatctgatgtacacacgttcatatcaaccgcgccat
gaactttggcccattccgctcgttgagatggaacgcaatctcaatctgacacaaaatccg
ggctggtaa
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