KEGG   Duncaniella sp. B8: FDZ78_12020
Entry
FDZ78_12020       CDS       T05963                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
dun  Duncaniella sp. B8
Brite
KEGG Orthology (KO) [BR:dun00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dun03016]
    FDZ78_12020 (truB)
Enzymes [BR:dun01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     FDZ78_12020 (truB)
Transfer RNA biogenesis [BR:dun03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    FDZ78_12020 (truB)
 Prokaryotic type
    FDZ78_12020 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: QCP73225
LinkDB
Position
2846486..2847211
AA seq 241 aa
MDFVTGEILYIDKPLEWTSFDVVKRLRGVILHKIHRKKFKVGHAGTLDPLATGVMVVVTG
RATKLIESLQAGVKEYVATLQLGATTPSFDLETEVDDTYPTEHITLESIQEILPRFIGRI
EQVPPAFSACKVDGKRAYKMARKGHDVELKPKVLVIDTIEITDFDQASMVLTLRIVCSKG
TYIRALARDIGEALGSGAHLIGLRRTRVGEATIERCLSVDAAVEMIRNAEVTFPEGEESQ
S
NT seq 726 nt   +upstreamnt  +downstreamnt
atggatttcgtaaccggagaaattttatatattgacaagcctcttgaatggacttcgttt
gatgtggtaaagcgtctgcgaggtgttatcctccacaagattcatagaaaaaaattcaag
gtgggacatgccggaacgcttgacccccttgctacgggagttatggttgtggtgaccggt
cgtgcgaccaaactgatagaatcgctgcaggctggagtgaaagagtatgtcgccactctg
caactcggagcaacaaccccttcttttgaccttgaaacggaagtcgatgacacatatccg
actgaacatataactcttgagtcgatacaggagattttacctcgttttataggtcgcata
gagcaggtcccacccgcattttcagcatgtaaggtcgatggcaaacgggcctataagatg
gcacgcaaaggtcacgatgtagaacttaagcccaaagtgctggtcattgacaccattgag
atcacagactttgatcaggcttcgatggtcttgacgctcagaattgtttgcagcaaagga
acttatatccgggctcttgcgcgtgacatcggtgaggctcttggctccggagcgcatctg
atcggcttgcgccgcacaagagtgggcgaggctaccatagagcgctgtcttagtgtcgat
gctgctgtagagatgatcagaaatgcagaagtgactttccctgaaggagaggaatctcaa
agttga

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