Duncaniella sp. B8: FDZ78_12645
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Entry
FDZ78_12645 CDS
T05963
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dun
Duncaniella sp. B8
Pathway
dun03030
DNA replication
dun03430
Mismatch repair
dun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FDZ78_12645
03430 Mismatch repair
FDZ78_12645
03440 Homologous recombination
FDZ78_12645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dun03032
]
FDZ78_12645
03400 DNA repair and recombination proteins [BR:
dun03400
]
FDZ78_12645
Enzymes [BR:
dun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FDZ78_12645
DNA replication proteins [BR:
dun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FDZ78_12645
DNA repair and recombination proteins [BR:
dun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FDZ78_12645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QCP73334
LinkDB
All DBs
Position
complement(2958139..2958639)
Genome browser
AA seq
166 aa
AA seq
DB search
MDNFIAIDVETANNEPSSICAIGAIKVIGGVITDRFYELVKPEPEYYFRHFTQNIHGIGR
EDTENARVFSEVWRDIHRFIGDLPLVAHNKAFDEKCIRAAHRVYGMDYPDYPFYCTLTAA
RKQIPRQMLTSYSLPFVCDFLGIPFYNHHDALADAEGCAKIAMTLL
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atggataacttcatagccattgacgtagagacagccaacaacgagccgtcatcaatctgc
gctatcggcgctataaaagtcatcggcggagtaatcaccgaccggttctacgagctcgtc
aagccggaaccggaatactacttccgtcatttcacacagaacatccacggcatcggacgc
gaggacactgaaaacgcaagagtgttttcagaggtgtggcgagatatccaccggtttatc
ggagatctcccgcttgtggcccacaacaaggcatttgacgagaaatgtatccgtgccgcc
caccgcgtctacggcatggactatccagattacccattctactgcaccctgaccgccgcc
cgtaaacagattccacgccagatgctgacatcatattcactgccatttgtctgtgatttt
ctcggcatacccttctacaaccatcacgatgcactcgccgatgccgaagggtgtgcaaaa
atagcaatgacacttctatga
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