Duncaniella sp. B8: FDZ78_12690
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Entry
FDZ78_12690 CDS
T05963
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
dun
Duncaniella sp. B8
Pathway
dun03030
DNA replication
dun03430
Mismatch repair
dun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FDZ78_12690 (holA)
03430 Mismatch repair
FDZ78_12690 (holA)
03440 Homologous recombination
FDZ78_12690 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dun03032
]
FDZ78_12690 (holA)
03400 DNA repair and recombination proteins [BR:
dun03400
]
FDZ78_12690 (holA)
Enzymes [BR:
dun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FDZ78_12690 (holA)
DNA replication proteins [BR:
dun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FDZ78_12690 (holA)
DNA repair and recombination proteins [BR:
dun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FDZ78_12690 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
HP_1247_M
AAA_22
RcsA_N
Torsin
Motif
Other DBs
NCBI-ProteinID:
QCP73343
LinkDB
All DBs
Position
2966249..2967283
Genome browser
AA seq
344 aa
AA seq
DB search
MASATPTFSELRRQLAARTSLSPVYLLHGEEGYYIDELVKDFENLIPEEERDFNLYTLYA
PESGIETVMDVCHRYPMMAERQVVIVKEAQAVRADMLNKLHNYVAQPNPTTILVISCRGA
QAKGKELLAAVRKNGVIFESKRLSERNILPVISDLIKEKKLNVDAKALSMLRDYIGTDLS
RLYNEIDKLALILGQGAMITPEAIERNIGISKDYNNFELIDAIIARNAAKAFAIIEYFRN
NPKSNPTVMTVSSLFNQFSNLLVYHYTRDKTQSGYMDALGLRSPWALKSYEAAARSYNVR
QTIEIISAIREFDTRSKGIGSRQNEYDLLKDLVFHILTARGIIG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgcgactcctacattttcagaactccgacgtcagcttgccgcacggacgtct
ttatcacccgtctacctgcttcatggagaggaaggctattatatcgacgagctcgtaaag
gattttgaaaacctgattcccgaagaggagcgtgatttcaatctctacactctctatgct
cctgaatcaggcattgagactgtcatggatgtctgccaccgctacccgatgatggccgag
cgccaggtggtgatagtaaaggaggcccaggcagtcagagccgatatgctcaacaagctg
cataattatgtggctcagccaaacccgactacaattctggtgatctcctgccgcggtgca
caggccaagggcaaggaactgcttgccgctgtcaggaaaaatggagtgatatttgaatcc
aaaaggctcagcgaacgcaacattctgccggtgatctctgatctgatcaaagagaagaaa
ctcaatgtcgatgccaaggctctttctatgttgcgtgactatatcggcactgatctgtcg
cgcctttacaatgaaatagacaaactggcactgattcttggacagggagccatgatcacc
cctgaagccatcgagcgcaacatcggcatatcgaaagactacaacaacttcgagctgata
gatgccataatcgcccgaaatgcagccaaggcattcgccatcatcgaatatttcagaaac
aacccgaagagcaacccgacggtgatgaccgtatcctctctgttcaaccagttttccaat
ctgctggtctatcattacacccgcgacaaaacccagagcggctacatggacgctctcgga
ctgcgttcgccctgggccttgaaatcatatgaagccgccgcgcggagctacaatgtcagg
cagaccattgagatcatctcggccatacgcgaatttgatacccgcagcaaaggcatcggc
tctcgtcagaatgaatatgacctgctgaaagacctggtcttccacatactcaccgcccgc
ggaatcatcggatga
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