Duncaniella sp. B8: FDZ78_13425
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Entry
FDZ78_13425 CDS
T05963
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
dun
Duncaniella sp. B8
Pathway
dun00300
Lysine biosynthesis
dun00470
D-Amino acid metabolism
dun00550
Peptidoglycan biosynthesis
dun01100
Metabolic pathways
dun01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
dun00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FDZ78_13425
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FDZ78_13425
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FDZ78_13425
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
FDZ78_13425
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dun01011
]
FDZ78_13425
Enzymes [BR:
dun01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
FDZ78_13425
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
FDZ78_13425
Peptidoglycan biosynthesis and degradation proteins [BR:
dun01011
]
Precursor biosynthesis
Amino acid ligase
FDZ78_13425
Racemase
FDZ78_13425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QCP73476
UniProt:
A0AAE6BWI6
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All DBs
Position
3124026..3126503
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AA seq
825 aa
AA seq
DB search
MQYSISEIAKIIGADSLLPAPDSRISRLLTDSRSLTYPSDTLFFALETSSGDGHRYVKSL
YDRGVRSFVVSGSFSCSDDLQDANILYVESPLAALQTLAANHRRRYDVPLIAITGSRGKT
TVKEWLNQLLQADIEIVRSPRSYNSQIGVPLSVWQLDKDSAMGIFEAGISQPGEMAKLKE
ILKPEIGIFTNIGPAHSAGFESIEQKCREKALLLDGCRSIIYNADDPLISGCVKAAPEMI
GWSRTDPEAPLYICDVVRGNGRTEFRYIYKGGQSAVLEIPFEGEHELENAIHCLAVMLLF
GINQETIRRRMASLTPVGTRLEVIEGVNGCLLVHDNYTSDFNSLAPALDFMKRRITPDCK
AMVIVSDLMHDADTDLEDLYRRMAELLAIAGVSRVIGIGPELMAHKGCFGPESEFFASTE
EFLHKKSTSDFRGELILIKGAPEFGFGRICELLEARQHETVLEINLDAVVSNFNAFRSRI
KPTTAIACMIKASGYGAGSHELARTLQAQGASYLAVAVHDEGADLRRAGITMPILVLNPT
VENFHALFADRLEPEIYSFDFLRALIREAGRYGITDYPVHIKIDSGMHRLGFLKEDLPEL
IELLRSQDRVVPRSIFSHLCAADDPMEDDYTQQQFDYFDECCRMLLSAFPERKILRHILN
STGITRFPDHQLDMVRLGIGLYGVKTMHDGSQDDLRPVSSLNTVIISLKNWPEGTTIGYN
RRGTLKRQSVIATIPVGYADGINRHLGYGNTSVMVNGIKCPTVGSICMDACMIDVTDVAD
VKVGDRVEIFGENIPVDDLAEVLGTIPYEVLTSVSQRVKRVYYRE
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgcaatattcaatttctgaaatagcaaaaataatcggggcagattcattattgcctgct
cctgattctaggatatcacgactgttgacagacagccgttcgctgacatatccgtcagac
acattgttttttgcccttgaaacatcttctggtgacggacaccgctatgtcaagtcgctc
tatgaccgcggagtgcgtagttttgtggtgtcaggctcattttcatgctcggatgatctt
caggatgctaatatcctttatgttgagtctccgttagctgcgttgcagactctggccgcg
aatcatcgccggcgttacgatgtgcctctgattgccattacaggcagtcgaggaaaaacc
actgtgaaagaatggctcaatcaattgcttcaggccgatattgaaatcgtaagaagccca
cgcagctacaactcgcagataggtgtgcctttgtcggtctggcagcttgacaaagactcc
gctatggggatatttgaagccggaatctcgcaaccgggtgaaatggcgaagcttaaggag
atacttaaacctgaaatcggcatcttcaccaatatcggtccggctcacagtgccggtttt
gagtcgatagagcagaagtgtcgggagaaagctctgcttctagacggttgcagaagtatc
atctataatgcggatgatcctttgatttcaggctgtgtgaaagctgcacctgaaatgata
gggtggtcacggactgatcctgaggctccgctgtatatctgcgatgttgtcagaggaaat
ggccggaccgaatttcgctatatatataaaggtggtcagagcgccgtgctggaaattccg
tttgagggagagcatgaacttgagaatgctatccattgtcttgctgtgatgcttctgttt
ggaataaatcaggagaccatacgccggcggatggcatcacttacgcccgttggcacacgc
cttgaagtcattgagggtgtcaatggctgtctgcttgtccatgacaactacaccagcgat
ttcaattctcttgctccggcgcttgatttcatgaaacggagaattaccccagattgtaag
gctatggtcattgtcagtgatctgatgcacgacgccgataccgatctggaggacctttac
cgccgtatggccgagttgctggctattgcaggtgtgagccgggtgatcgggatcggccct
gagctgatggcccacaagggttgcttcggcccggagtctgaattttttgcctctacagaa
gagtttctacataaaaaatctacgtctgatttccgaggggagttgattttgataaaggga
gcccctgaatttggattcggacgcatctgcgaacttcttgaagcccggcagcatgaaacg
gtgctggaaatcaatcttgatgccgtggtatcgaatttcaatgccttccgctcgcgtatc
aagcctaccacagctatcgcctgcatgatcaaggcatcgggatacggcgctggctcacat
gaacttgcgcgcaccttgcaggctcagggggcatcatatcttgccgtggccgtccatgac
gaaggtgcagacctgcgtcgtgcaggaatcacaatgcctattctggtattgaatccgacg
gttgagaatttccatgccttgtttgccgatcgtctggagcctgagatatacagctttgac
ttcctgcgtgcattgatccgcgaggcagggcgctatggcattacggactatccggtccat
atcaagattgattccggcatgcaccgtctcggattccttaaagaggatctccctgaactg
atcgagctgctcaggagccaggatagagtagttccacgctcgatattctcgcatctctgt
gccgcggatgatccgatggaggatgactatacgcagcagcagttcgattattttgatgaa
tgttgccggatgctcctttcggcattccctgaacggaaaatactgcggcatattctgaac
tctacaggcatcacacgtttccctgatcatcagcttgatatggtgcgtctcggaatcggg
ctctatggagtcaagactatgcatgacggttcgcaggatgatctgcgtcctgtctcttca
ctcaacactgtgattatctcactgaaaaactggcctgaaggaaccacaatcggctacaac
cgccgtggaacgttaaagcggcagtcggtgattgccaccattccggtaggttatgccgat
ggcattaaccgccatctcggctatggcaatacatcggtgatggtcaatggtatcaaatgt
cccacagtcggaagcatctgcatggacgcctgcatgattgatgtcacggacgtggctgat
gtcaaagtcggagaccgtgtggagatattcggcgaaaatattccggtcgacgatcttgcc
gaagtcctcggtacaataccctatgaagtcctgacctccgtgtcgcagcgcgttaaacgc
gtctactatagagagtga
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