Duncaniella sp. B8: FDZ78_13665
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Entry
FDZ78_13665 CDS
T05963
Name
(GenBank) transporter substrate-binding domain-containing protein
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
dun
Duncaniella sp. B8
Brite
KEGG Orthology (KO) [BR:
dun00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dun01011
]
FDZ78_13665
Enzymes [BR:
dun01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
FDZ78_13665
Peptidoglycan biosynthesis and degradation proteins [BR:
dun01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
FDZ78_13665
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
SLT_2
Motif
Other DBs
NCBI-ProteinID:
QCP73516
UniProt:
A0AAE6ER63
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All DBs
Position
complement(3183901..3185289)
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AA seq
462 aa
AA seq
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MKNGLKILAPITLVLCLATLYSCSRNGVSGNTTSAAGNHLLPDTLKVVTLYSPEAYFIYK
GQEMGYDYELVTSLAVDKDIALKIEIAPTLSRAVEMLDSGLVDLIAYEVPITAEYKDNVV
ACGPETVTTQVLVQPKKGEAELIDDVTDLVGKDVYVEADSKYEARIRNLNDELGGGINIH
TVSRDTMITEDLIAMVSKGSIPLTIVDSDIARINKTYYNDLDITLPLSFEQRAAWAVAPD
RAWLGDSINAWLNSDKPREEQAMLLKRYFEMSKNEPGGRYAFNGSRVTPFDHLFKQYAAN
YGWDWKLLASQAYVESKFDSTAVSWAGARGLMQIMPKTAKGYGQTAKSVMKNDVAIETAL
KLLKDLDKQLAAKVPDENERKKFVIAAYNSGIAHVYDAINLAKKYGLNPQKWDNNVAKAI
LWKSNPRYYKDPVVKYGYSRGRETFDYVNRVYRFYNKARIKA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatggtttgaaaatattggctcctataacactggtactctgcctggccacactt
tacagttgtagccggaacggagtgtcaggtaatactacatcagcagccggaaaccaccta
ttgcctgacacgctgaaggttgtgacactatacagtcctgaagcatattttatctacaaa
ggacaggaaatgggctatgactatgaacttgtgacgtctttggcggtcgacaaggatata
gccctgaaaatagagatcgcccctactctttcacgggcggttgaaatgcttgactccgga
ctggtcgatctgatagcctatgaagtgcctataacagctgaatataaagacaatgtagtt
gcctgcggcccggaaactgtgacaacccaagtacttgtacaacccaaaaagggtgaagca
gaactcatcgatgatgtcactgatcttgtaggcaaagatgtttacgtagaagccgattca
aaatacgaagcccgaatccgcaatctaaacgatgaactcggaggcggaataaacatccac
actgtcagccgtgacacgatgatcacagaagatctcatcgcaatggtcagcaaaggctcc
attccgcttaccattgtagacagcgatattgcccgaatcaacaagacatactacaacgat
ctcgacatcactctcccgcttagtttcgaacaacgagcagcatgggctgtagctccggac
agagcttggcttggcgacagcatcaacgcatggcttaacagtgacaagccaagagaagaa
caggcaatgctgctcaaacgttactttgaaatgagcaaaaacgaacccggaggccgctac
gcattcaacggaagcagagtcacaccatttgaccatctgttcaagcagtatgcagcaaac
tatggctgggactggaaacttctcgcctcccaagcatatgtagaaagcaaatttgactct
acggctgtatcgtgggctggagcaagaggcttgatgcagataatgcctaagaccgcaaaa
ggttatggccagacagcaaaaagcgtgatgaaaaatgatgtagcgattgaaaccgcgctt
aagcttcttaaagatcttgacaaacaactggctgcaaaagtcccagacgaaaacgagcgg
aagaagttcgttatcgccgcctataattccggtatagcacatgtctatgacgccataaat
cttgcaaaaaaatatgggctaaaccctcagaaatgggacaacaatgtggccaaagcaatc
ctttggaaatcaaatccaagatactataaagatccggtggtaaaatacggatattcccgt
ggacgtgaaacatttgactacgtcaaccgagtctaccgcttttacaacaaagcacggatc
aaagcctga
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