Duncaniella sp. C9: E7745_02180
Help
Entry
E7745_02180 CDS
T09932
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
duq
Duncaniella sp. C9
Pathway
duq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
duq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E7745_02180 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
duq03019
]
E7745_02180 (rny)
Messenger RNA biogenesis [BR:
duq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
E7745_02180 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
Neur_chan_memb
KH_2
PFF1_TM
Cas3_HD
DUF4686
Motif
Other DBs
NCBI-ProteinID:
QCD38448
LinkDB
All DBs
Position
539112..540653
Genome browser
AA seq
513 aa
AA seq
DB search
MDILFYICAALIGAAIGIVIMVAVQRSTARSRAKTIIDDANREAEVIMKDKLLEAREQEL
RIKTEAEKQANQRLQRIQSEESKLKQRQTQLNQQQSENARARNENEQTRQNLEAQLAVVD
QRKEELDRLRRTAQDTLEHISGLSSEEAKEKLIESLKDEAKTAASAYINDIMDEAKMTAN
KEAKRIVVQSIQRLATETAIENSVTVFHIDSDEIKGRIIGREGRNIRALEAATGIEIIVD
DTPEAIVLSGFDPVRREIARLALHQLVADGRIHPARIEEVVAKVRKQIEEEIIETGKRTA
IDLGIHGLHPDLIRMVGKMKYRSSYGQNLLQHSRETANLCAIMAAELGLNPKKARRAGLL
HDIGKVPDEEPELPHALLGMKLAEKYKEKPEICNAIGAHHDEIEQTSLLAPIVQVCDAIS
GARPGARREIVEAYIKRLNDLEQLALSYPGVIKTYAIQAGRELRVIVGADKIDDVETEKL
SSEIARRIQDEMTYPGQVKITVIRETRSVSFAK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggatatattattctacatctgcgccgccctcataggggccgccatcggaatagtgatc
atggtagccgtccagcgatcaaccgcccgctcgcgcgccaaaacgataatcgacgatgcc
aaccgcgaggcagaagtgatcatgaaagacaaacttctcgaagcccgcgaacaggaactc
cgcatcaagaccgaagccgaaaagcaagcaaatcagcgcttgcagcgcatccagagcgaa
gagtcgaaactcaaacagcgccagactcagctcaaccagcagcagagcgaaaacgcccgc
gccagaaacgaaaacgagcagacccgccagaatctcgaagcccagctcgccgtggtcgac
cagcgcaaggaagaactcgaccgcctgcgccgcaccgcccaggacaccctcgaacacatc
tcaggactctcaagcgaagaagccaaggaaaagctcatcgaatcgctcaaggacgaagcc
aagacagccgcaagcgcctacatcaacgacatcatggacgaagccaagatgacggccaac
aaggaagcaaagcgcatcgtggtccagtcaatccagcgcctcgccacagagaccgccatt
gaaaactccgtgacagtcttccacatcgacagcgacgagatcaaaggccgcatcataggc
cgcgaaggccgcaacatccgcgccctcgaagccgcgacagggatcgaaatcatcgtcgat
gacacccctgaagccatagtgctctcaggcttcgaccccgtgcgacgcgagatagcacgc
ctcgccctccatcagctcgtggccgacggccgcatccaccccgcccgcatcgaggaagtt
gtggccaaagtgcgcaaacagatcgaggaagagatcatcgaaaccggcaagcgcacagcc
attgacctcggcatccacggcctccaccccgacctcatccgcatggtcggaaaaatgaaa
taccgctcaagctacggacagaacctcctgcagcactcgcgcgagaccgcaaacctctgc
gccatcatggccgccgagctcggactcaaccccaagaaagcccgtcgcgcaggcctgctc
cacgacataggcaaagtgcccgacgaagagcccgaactgccccacgcactcctcggcatg
aaactcgccgagaaatacaaggaaaaacctgagatctgcaacgccatcggcgcccaccac
gacgaaatcgaacagacctcgctcctggcccccatcgtccaggtctgcgacgcaatctca
ggcgcacgtcccggcgcccgccgcgagattgtcgaagcctatatcaagcgtctcaacgac
ctcgaacagctcgccctcagctatcccggcgtgatcaagacctacgccatccaggccggc
cgcgaactgcgcgtgattgtcggagccgacaagatcgacgacgtcgagaccgaaaagctc
tcatcggaaatcgcccgccgcatccaggacgaaatgacatatcccggacaggtcaaaatc
accgtaatccgcgagacccgctccgtaagcttcgccaagtaa
DBGET
integrated database retrieval system
