Duncaniella sp. C9: E7745_03750
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Entry
E7745_03750 CDS
T09932
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
duq
Duncaniella sp. C9
Pathway
duq03030
DNA replication
duq03410
Base excision repair
duq03420
Nucleotide excision repair
duq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
duq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E7745_03750 (polA)
03410 Base excision repair
E7745_03750 (polA)
03420 Nucleotide excision repair
E7745_03750 (polA)
03440 Homologous recombination
E7745_03750 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
duq03032
]
E7745_03750 (polA)
03400 DNA repair and recombination proteins [BR:
duq03400
]
E7745_03750 (polA)
Enzymes [BR:
duq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E7745_03750 (polA)
DNA replication proteins [BR:
duq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
E7745_03750 (polA)
DNA repair and recombination proteins [BR:
duq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
E7745_03750 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E7745_03750 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
Motif
Other DBs
NCBI-ProteinID:
QCD38729
LinkDB
All DBs
Position
complement(916400..919192)
Genome browser
AA seq
930 aa
AA seq
DB search
MEKRLFLLDAYALIYRAYYALIRSPRFAGNGFNTSAVFGFCNTLDELLRKENPSHIAVCF
DPSGPTFRHEEFADYKANRDKQPEDITASVPYIKRILEAYRIPVIEVKGYEADDVIGTLA
KRAAAEGYDTYMMTPDKDYGQLVDDHIFMYRPALRGEGFEIRDAAKVCERYGIARPSQVI
DLLALEGDASDNIPGCPGVGEKTARTLIETWGSVENLLENTDSLKGALQKKVRENADQIR
LSKYLATIKTDVPVDISVSSLERKPMDVDKLLEVYGELEFRTLAARLKAGARQGQADTQP
AAAPAPPQPEADSSGMGSLFDMPDDGATASDTPAQACESRDYRRIESPAEAALVVSRISG
SEFIGTSFYAIGEDSMTARWSGLALSVSDCEGWFIDLPADSPERRAELLAVIEPLFTGSA
TLVSHDVKRGYLLLKKEGVNLTAPWFDTSVAHYLIDPEMKHELRYVVAKYLRLELAGVAP
DSKAGHPKTALEPEAAVARYCEEADLALRLRAPLQSDVDSREMGRLLADVEFPLIRVLAE
MEFTGVRIDSNVLTDLSARLKERIRALEEEAYEMAGGPFNIGSPAQVGMVLFERLNIDPK
AKKTARGSYSTTEQVLEKYAPKVPLVSLILKIRRLKKLVTTYLDALPALVNPQTGKIHTS
YNQTVTATGRISSTNPNLQNIPVRTDEGREIRRAFIADPGDMIMSADYSQIELRLIADLS
ADRDMIEGFLSGDDIHRITASKIYGVPLEEVTDDQRRHAKTANFGIIYGISAFGLSERLG
IARAEAKKLIDGYFATYPHIREYLSKSVETAREQGYVSTRMGRRRYLPDINSRNAVVRGY
AERNAVNAPIQGSAADIIKVAMISIFNEMEARGMRSRMLMQVHDELIFNIVPGETEEMRK
LVVSCMENAYHGAVPLTVSAGIADNWLGAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacgcctattcctgctcgatgcatacgctctgatctaccgggcctactatgcc
ctgatacgttcgccacgctttgccggcaacgggttcaacacctcggctgtgttcggcttc
tgcaacacgctcgacgaacttctgcgcaaggaaaacccttcgcacatagccgtgtgcttc
gatccttcaggtccgacattccgccacgaggaattcgccgactacaaagccaaccgcgac
aagcagccggaagatatcaccgcgtcggtgccttatatcaagcgtatcctcgaagcctac
cgcatcccggtgatcgaggtgaagggctatgaggccgatgacgtgataggcactctggcc
aagcgcgcggccgccgagggttatgacacctacatgatgacccctgacaaggactacggc
cagctggtcgatgaccatatcttcatgtatcgtccggcgctccgtggcgagggcttcgag
atacgcgacgcagccaaggtctgtgagcgctacggaatagcccgcccctcgcaggtgata
gacctcctggcgctcgaaggggatgcctccgacaacattcccggctgtccgggtgtcggc
gagaagaccgcccgcaccctgatcgagacctggggatctgtggaaaacctgctcgaaaac
actgacagcctcaaaggcgcgctgcagaaaaaggtccgcgagaacgccgaccagatccgc
ctttcaaaatatcttgccacgatcaagaccgatgtgcccgtggatatttccgtcagctcg
ctcgaacgcaagccgatggacgtggacaagctgcttgaggtttacggcgaactggagttc
cgcactctggccgcgcgcctcaaagccggagcccgccaggggcaggccgacacacagccg
gctgccgcccccgccccgccacagcctgaggctgacagcagcggcatgggatcgctcttc
gacatgcccgatgacggcgccacggcttccgacactccggctcaggcctgcgagagccgc
gactaccgccgcatcgaaagtccggctgaagcagccttggtggtcagccgcatttccggt
tcggaattcatcgggacatcgttctacgccatcggcgaggacagcatgaccgcgcgctgg
tcaggactcgctctttcagtgagcgactgcgagggctggttcattgatctccccgccgac
tcgccggaacgccgcgccgaactgcttgcagtgattgagccgctgtttaccggcagcgcc
actctggtgagccacgatgtgaaacgcggctatctgctgctcaaaaaagaaggcgtcaat
ctgacagccccctggtttgacacctccgtggcccactatctgatcgatccggaaatgaaa
cacgagttgcgctatgtggtggccaaatatctccgcctcgaactcgcaggagtggccccg
gattcaaaagcaggccacccgaagacggcgcttgagccggaggccgccgtggcccgctac
tgcgaggaggccgatctggccctgcggctgcgcgctccgctccagagcgatgtggatagc
cgcgagatgggccggctgctggccgatgtggagtttccgctgatcagagtgctcgccgag
atggaattcacaggagtgagaatcgactcaaacgtgcttaccgacctctccgcccggctg
aaagagcgtatccgcgctctggaggaagaggcctatgaaatggccggcggtccgttcaac
atcggctctcccgcccaggtcggcatggtgctgttcgaaaggctcaacatcgaccccaag
gccaagaagaccgcccgcggatcctactcgacaaccgagcaggtgcttgagaaatatgcc
ccgaaggtgcccctggtcagcctgattctgaagatcaggcgcctcaagaagctggtgacc
acctatcttgacgcactcccggcgctggtcaatccgcagaccggaaaaatccacacctcc
tataaccagacagtcactgccaccgggcgcatatcgtcgaccaaccccaacctgcagaat
atccccgtcaggactgacgaaggccgcgagatacgccgcgcgttcatagccgatccgggc
gacatgatcatgagcgccgactattcacagatcgagttgcgcctcatagccgatctgtcg
gcagaccgcgacatgatagaaggcttcctctcaggcgatgacatacaccgcatcacggca
tctaaaatctacggtgttccgctcgaagaggtcactgacgaccagcgccgccacgccaag
acggccaacttcggtatcatctacggcatctcggccttcggtctgtcggagcgtctggga
atagcccgcgccgaagccaagaaactgatcgacggatatttcgccacctatccccacata
cgcgaatatctcagcaaatcagtggagactgcccgcgagcagggctatgtcagcacccgc
atgggtcgccgccgctatctgcccgacatcaactcgcgcaatgcggtggtgcgcggctat
gccgaacgcaatgccgtcaacgcccccatccagggctcggccgccgacatcatcaaggtg
gccatgatcagcatcttcaacgagatggaagcccgcggcatgagatcgagaatgctgatg
caggtgcatgacgaactcatattcaacattgtgcccggagagaccgaagagatgcggaaa
ctcgtagtcagctgcatggaaaacgcctatcacggcgcagtgccactgacagtctcagcc
ggcatagccgacaactggctcggagcacactga
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