Duncaniella sp. C9: E7745_06000
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Entry
E7745_06000 CDS
T09932
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
duq
Duncaniella sp. C9
Pathway
duq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
duq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
E7745_06000 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
duq01007
]
E7745_06000 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
duq03016
]
E7745_06000 (serS)
Enzymes [BR:
duq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
E7745_06000 (serS)
Amino acid related enzymes [BR:
duq01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
E7745_06000 (serS)
Transfer RNA biogenesis [BR:
duq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
E7745_06000 (serS)
Prokaryotic type
E7745_06000 (serS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF4164
LidA_Long_CC
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
QCD39115
LinkDB
All DBs
Position
1472168..1473439
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AA seq
423 aa
AA seq
DB search
MLTLQQIKEDPERIIARLAVKGFDGKQGVNDVIDFDDERRSLQYQNDTLAAELKKYADSI
GRLMKEGRRNEADEAKKKVAEIKATQKEVADRLAVTENAIRDILLGMPNIPCDAVPEGKT
AEDNVVEKTGGPMPELPADALPHWELAKKYNIINFDLGVKITGPGFPVYIGKGARLQRAL
IQFFLDRAGDAGYLEIQPPYVVNEASGYGTGQLPDKEGQMYFINEDKLYMIPTAEVPVTN
IYRDVIIPGEELPKKNCAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIEKPENSYAA
LEEMKDHVQGLLESLGLPWHILRLCGGDMSFTSAITFDFEVYSAAQGRWLEVSSVSNFET
YQANRLKCRYRGEDKKTHLCHTLNGSALALPRIMAAILENNQTPQGIVIPECLRKYTGFD
IID
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcttacccttcagcagatcaaagaggatcccgaacgcattatcgcgcgcctcgccgtc
aaaggatttgacggaaaacagggagtcaacgatgttattgatttcgatgacgagcgccgc
tctctccaatatcagaacgacactctggcagccgaactgaaaaagtatgccgattcgatc
ggccgtctgatgaaagaaggccgtcgcaacgaggctgacgaggccaagaaaaaggtagcg
gaaatcaaagccacacagaaagaagtggccgaccgtctggccgtgaccgagaatgccatc
cgtgacattctgctcggtatgccgaatatcccttgcgatgcagtgcctgaaggcaagacc
gcagaggacaatgtggtggagaagaccggtggcccgatgcccgaacttcctgccgatgcg
ctcccgcactgggaactcgccaagaagtacaatatcatcaacttcgatctcggagtcaag
atcacaggccccggcttccccgtttatatcggcaagggcgcgcgtctgcagcgagctctc
attcagttcttccttgaccgtgccggcgatgccggatatcttgaaatccagccgccctac
gtggtgaacgaggcctccggctacggaacagggcagctgcccgacaaggaaggccagatg
tatttcatcaacgaagacaaactctacatgatcccgaccgccgaggtgccggtgaccaat
atctatcgcgatgtcatcatccccggcgaagagctcccgaagaaaaactgcgcctactcg
gcatgcttccgtcgcgaggcagggtcctacggcaaggatgtccgcggtctcaaccgtctg
catcagttcgacaaggtagagattgtccgcatcgagaagccagaaaactcttatgcggct
cttgaagagatgaaagaccatgtgcagggactgcttgagtctctcggtctgccctggcac
atactccgtctctgcggcggcgacatgagcttcacctctgccatcacatttgactttgaa
gtctattcggcagcccagggccgctggcttgaggtttcgtcggtatccaatttcgagaca
tatcaggcaaaccgtctcaagtgccgctaccgtggggaagacaagaaaacccatctctgc
catacgctcaacggttcggcactcgcccttccgcgcatcatggcagccatccttgaaaac
aaccagacacctcagggcatagttatccccgaatgtctgcgcaaatacaccggattcgat
atcatcgactaa
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