KEGG   Duncaniella sp. C9: E7745_07515
Entry
E7745_07515       CDS       T09932                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
duq  Duncaniella sp. C9
Pathway
duq03030  DNA replication
duq03430  Mismatch repair
duq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:duq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    E7745_07515
   03430 Mismatch repair
    E7745_07515
   03440 Homologous recombination
    E7745_07515
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:duq03032]
    E7745_07515
   03400 DNA repair and recombination proteins [BR:duq03400]
    E7745_07515
Enzymes [BR:duq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     E7745_07515
DNA replication proteins [BR:duq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     E7745_07515
DNA repair and recombination proteins [BR:duq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     E7745_07515
SSDB
Motif
Pfam: RNase_T ExoX-like_C RNase_H_2 Rv2179c-like
Other DBs
NCBI-ProteinID: QCD39380
LinkDB
Position
1860198..1860959
AA seq 253 aa
MQLNLKKPIVFFDLETTGVDILHDRIVEISLIKIMPDGQEIEKTRRVNPEMPIPAEATAV
HHITDEDVAGEPTFRQIARSLANELTGCDIAGFNSNRFDVPMLDQEFQRSGVKFDFSKAR
FIDVQTIFHKKEQRTLVAAYKFYCGKDLDGAHSANADTRATYEVLKAQLDRYDDLPNDME
ELSKYSRVNRNVDFMGRIILDDKDRELVNFGKYKGQPVTDVLRKDPSYYDWIMKGDFAQN
TKDCFTRIKLAMK
NT seq 762 nt   +upstreamnt  +downstreamnt
atgcagcttaatctgaaaaagcccatagtattttttgatcttgagaccaccggagtggat
attctccatgaccgtatagtcgaaatttcgctgataaagataatgcctgacggacaggag
atcgagaagacacgcagagtcaatcctgaaatgcctattccggccgaagccacagctgtc
catcatatcacagacgaggatgtggccggagaaccgacatttaggcagattgcgcggtca
ctggccaatgaattgaccgggtgtgacatagccggtttcaattcaaaccgtttcgatgtc
ccgatgcttgatcaggaattccagcgttcaggggtcaaattcgacttctcgaaagcccgt
tttatcgacgtgcagacaatttttcataagaaagaacagcgcacgcttgtggctgcctat
aaattctattgcggcaaggatcttgacggcgcgcattcagccaatgccgacacccgcgct
acttatgaagtgcttaaggcgcaacttgaccgttatgacgatctgccgaatgacatggaa
gaactcagcaagtattccagagtcaaccgcaatgttgatttcatgggccgcatcattctc
gatgataaagaccgcgaactggtgaacttcggcaaatacaaaggccagcccgttacggac
gtgttgcgcaaggacccttcgtattatgactggatcatgaaaggtgactttgcacagaat
acaaaagattgtttcacccgcattaaactcgcaatgaaatga

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