Dermabacter vaginalis: DAD186_05180
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Entry
DAD186_05180 CDS
T04434
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dva
Dermabacter vaginalis
Pathway
dva03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dva00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DAD186_05180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dva03021
]
DAD186_05180
03400 DNA repair and recombination proteins [BR:
dva03400
]
DAD186_05180
Enzymes [BR:
dva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DAD186_05180
Transcription machinery [BR:
dva03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DAD186_05180
DNA repair and recombination proteins [BR:
dva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DAD186_05180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ANP27073
UniProt:
A0A1B0ZGN0
LinkDB
All DBs
Position
612083..615970
Genome browser
AA seq
1295 aa
AA seq
DB search
MLDVNHFDELKIGLATADDIRSWSFGEVKKPETINYRTLKPEMDGLFCERIFGPTRDWEC
YCGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITKVDDEARHADMPELQSRHDLEIRELENERDAAINERAVTAEKD
LAQLEEEGAKADAKRKVRDSAEREQAQIRKKYDAEITRVQNVWERFKNLEVADLEGDEQL
YRAMKLRYGHYFEGGMGAEAVQQRLLDFDLDSEAEKLREVIANGKGQKKARALKRLKVVS
AFQQTTNSPAGMVLDCIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRANLLGK
RVDYSGRSVIVNGPELHLHQCGLPKGMALELFKPFVMKRLVDLSLAQNVKAAKRMVERSR
PEVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPKLVEGKAIHLHPLVCGAFNADFDGDQ
MAVHLPLSPEAQAEARILMLSSNNILKPSDGRPVTMPAQDMIIGLYHLTTPKPEALGHGR
TFSSIAEAIMAFDNNEIDLNAPINVRFTDVVPPSDWKAPEGWNEGDAITLETTLGAYYFN
ETLPEDFPYVEGQVGKKRLGGIVNALAERYDKGQVSASLDALKSYGFSWSTYSGVTFAFS
DVVAPPNKAEIIAKYEAKAAQVEENRDLGLVSEAERSSELIDIWTEATNEVAEAMKSNFP
LDNTIYRMVHSGARGNWMQIRQIAGMRGLVNNPKGEIIPRPILSNYREGLSVLEYFIASH
GSRKGLADTALKTAQSGYLTRRLVDVSQDVIVREGDCGTSKGFTMAIGQDLDGTIVPADN
VEITAYGRTLAQDVAGEDGTVLASAGEDVGDVLIEKLIAAGVTEVKVRSVLTCDSAVGTC
AQCYGRSLATGQLVDIGEAVGIVAAQSIGEPGTQLTMRTFHSGGVASAEGDITHGLPRVQ
ELFEARTPAGFAPITEIAGRVSVDETDKQRKLTVTPDDGSEPVTYTLSRRVTPLVFDGDH
VEVGQQLSPGSVDPKQVLRILGPRAVQKHLVDEVQKVYVSQGVDIHAKHIEVIVRQMLRR
VTIVASGDTKLLPGDLVENAAFIEANRAVLAEGGEPAQGRPELMGITKASLATESWLSAA
SFQETTRVLTEAALSSKSDKLMGLKENVIIGKLIPAGTGLPRFRNFEVEPTDEAKAQMYT
VPGYDDFGLADFSGTGSNLNLDDFSYSDPFNTDFR
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaaccactttgacgagctcaagatcggccttgcgacggccgacgacatc
cgttcctggtcattcggggaagtaaagaagcccgaaaccatcaactaccgcaccctcaag
cccgagatggacggcctcttctgtgagcgcatcttcggcccgacccgcgactgggagtgc
tactgcggcaagtacaagcgcgtgcgattcaagggaatcgtgtgtgagcgctgtggcgtg
gaggtcaccaagtcctccgtgcgccgtgagcgcatgggccacattgagcttgctgccccc
gtgacccacatctggtacttcaagggcgtgcctagccgcctcggctacctgctcgacctt
gcaccgaaggacctcgagaaggtcatctacttcgcggcctacatgatcacgaaggtggac
gacgaggcacgtcacgccgacatgcccgagctccagagccgccacgatctcgagatccgc
gaactcgaaaacgagcgcgacgccgccatcaacgagcgcgccgtgaccgccgagaaggac
ctcgcccagctcgaggaagaaggcgcgaaggccgacgcgaagcgcaaggttcgtgactcc
gccgagcgcgagcaggcgcagatccgcaagaagtacgacgcggagatcacgcgcgtgcag
aacgtgtgggagcgcttcaagaacctcgaggttgcggacctcgagggcgatgagcagctt
taccgtgcgatgaagctccgctacggccactacttcgaaggtggcatgggcgccgaggcc
gtgcagcagcgcctgctcgacttcgacctcgactccgaggctgagaagctccgcgaggtc
atcgcgaacggcaaggggcagaagaaggcccgcgccctcaagcgcctcaaggttgtttcg
gcgttccagcagacgaccaactcgccggcagggatggtgctcgattgcatcccggtgatt
ccaccggatctccgccccatggtgcagctcgacggcggccgcttcgcgacgtccgatctc
aacgacctgtaccgccgtgtgatcaaccgcaacaaccgtctcaagcgcctcattgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcgcatgcttcaggagtcggtggactcg
ctgttcgacaacggccgccgtggccgcccggtcacgggccccggcaaccgcccgctcaag
tcgctctccgacatgcttaagggcaagcagggccgcttccgtgcgaacctgctcggtaag
cgcgtggactactcgggccgttcggtcatcgtgaacggtcctgagcttcacctccaccag
tgtggtcttccgaagggcatggcgctcgagctgttcaagccgttcgtcatgaagcgtctc
gtggatctctcgctcgcgcagaacgtcaaggccgccaagcgcatggttgagcgttcgcgc
cccgaggtgtgggacgttcttgaagaggtcatcaccgagcacccggtgctgctgaaccgt
gcacctacgcttcaccgcctcggtatccaggcgttcgagccgaagctcgttgaaggcaag
gccatccacctgcacccgctcgtgtgtggcgccttcaacgcggacttcgacggtgaccag
atggctgtgcacctccctctttcgcccgaggcgcaggccgaggcgcgcatcctcatgctc
tcctcgaacaacatccttaagccttcggatggccgcccggtgacgatgcccgcacaggac
atgattatcggtctgtaccatctgacgaccccgaagccggaggcgctcggtcacggccgt
acgttctcgtcgatcgccgaggcgatcatggccttcgacaacaacgagatcgacctgaac
gcaccgatcaacgtgcgcttcaccgatgtcgtgccaccgtcggactggaaggcccccgaa
ggctggaacgagggtgacgcgatcacgctcgaaaccacgctcggtgcctactacttcaac
gaaacccttcccgaggacttcccgtacgtggaaggccaggtgggcaagaagcgcctcggc
gggatcgttaacgcgctcgcagaacgctatgacaagggtcaggtttcggcttcgctcgac
gcactcaagtcgtacggcttctcgtggtcgacctattcgggtgtgacgttcgctttcagc
gacgttgtcgcgccgccgaacaaggctgaaatcattgcgaagtacgaggcgaaggccgcg
caggtcgaagaaaaccgcgatctcggtctcgtctccgaagccgagcgcagcagcgagctc
atcgacatttggaccgaggctaccaatgaggttgccgaggcgatgaagtcgaacttcccg
ctcgacaacaccatttatcgcatggtgcactccggtgcccgcggtaactggatgcagatt
cgccagatcgccggtatgcgcggcctcgtgaataacccgaagggcgagatcattccccgc
ccgattctctcgaactaccgcgagggtctttcggttctcgagtacttcatcgcttcgcac
ggctcgcgtaagggccttgccgataccgcgctcaagaccgcacagtcgggttacctgacg
cgtcgtctcgttgacgtctcgcaggacgtcatcgtgcgcgaaggcgactgtggaacctcc
aagggcttcacgatggcgattggccaggatctggacggcaccatcgtgcccgccgacaat
gtggagatcacagcctatggccgtacccttgcgcaggacgtggctggcgaagacggcacc
gtgcttgcttccgcgggtgaggacgtcggtgacgtgctcatcgagaagctcatcgctgcg
ggtgtgacggaagtgaaggttcgctccgttctcacgtgtgattccgccgtgggcacgtgt
gcgcagtgctacggccgttcgcttgcgaccggccagctcgtcgatatcggcgaggccgtg
ggtatcgtcgcagcccagtcgattggtgagcccggtacccagctcacgatgcgtaccttc
cactccggcggtgtcgcctcggcagagggcgatatcacgcacggtcttccgcgtgtgcag
gagctctttgaggcccgtaccccggccggcttcgccccgattaccgaaatcgcgggccgc
gtgagcgttgacgaaaccgacaagcagcgcaagctcaccgtgacaccggacgacggcagc
gagcccgtgacctacacgctctcgcgccgagtgaccccgctcgtgtttgacggagaccac
gttgaggttggccagcagctttcaccgggttcggtcgacccgaagcaggtgcttcgcatc
ctcggcccgcgtgccgtgcaaaagcacctcgtggacgaggtccagaaggtgtacgtgagc
cagggcgtggacattcacgcgaagcacatcgaggtcatcgtgcgccagatgctgcgccgc
gtcaccatcgtggcttcgggtgacacgaagctcctccctggtgacctcgtggaaaacgcc
gcgttcattgaagcgaaccgtgctgtactcgccgagggcggggagcccgcacagggccgc
cccgaactcatgggcatcacgaaggcgtcgcttgcgaccgagtcgtggctttcggccgcg
tcgttccaggagacgactcgcgttctcaccgaggctgcgctcagctcgaagagcgacaaa
ctcatgggcctcaaggagaacgtcatcatcggtaagctcatcccggcgggcacgggcctt
ccccgtttccgcaacttcgaggtcgagccgaccgatgaagccaaggcgcagatgtacacg
gttcccggctacgacgattttggcctcgccgatttcagtgggaccggttcgaacctgaac
ctcgacgacttcagctactcggatccgttcaacaccgatttccgctga
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integrated database retrieval system
