KEGG   Dermabacter vaginalis: DAD186_05790
Entry
DAD186_05790      CDS       T04434                                 
Name
(GenBank) tRNA pseudouridine(38-40) synthase
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
dva  Dermabacter vaginalis
Brite
KEGG Orthology (KO) [BR:dva00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dva03016]
    DAD186_05790
Enzymes [BR:dva01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     DAD186_05790
Transfer RNA biogenesis [BR:dva03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    DAD186_05790
 Prokaryotic type
    DAD186_05790
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: ANP27134
UniProt: A0A1B0ZGM1
LinkDB
Position
661629..662534
AA seq 301 aa
MNTEPKAPDSSPAPEKRLRVRLDLAYDGTAFKGWGIQPALRTVQGELEAGLAKIVREKVR
VTVAGRTDAGVHASGQVVHVDILEKQWRRMPGRSDRTCEESIIQRLAAVLPSDIAVHRAC
VVSEDFDARFSALSRTYRYRICDDYARRDPLRRDVAFHKRPLDAEAMHNAARALVGEHDF
LSFCKPREDATTIRTLHAVTWERPNTGKDEGLVVATVTADAFCHHMVRSIVGASVAVGEH
RLDAEWMAALVTIPRRDEAGSAPMFSPTGLTLEGIEYPEESAWAARATQTRGKRGVPFTR
G
NT seq 906 nt   +upstreamnt  +downstreamnt
gtgaacaccgagcccaaagccccagactcctcgcctgcccccgagaaacgccttcgcgtt
cgtctcgacctcgcctacgatggcaccgcgtttaaggggtggggaatccagccggcactt
cggaccgtgcagggtgagcttgaggcgggactcgcgaagatcgtgcgcgagaaggtgcgc
gtcacggtcgcgggccgcaccgatgcgggcgtgcatgcgagcggccaggttgtgcacgtg
gacatcctcgaaaagcagtggcgacgcatgccgggccgcagcgatcgcacgtgcgaggag
tcaatcatccagcgcctcgccgctgtcctgccgagcgacatcgcggttcaccgagcatgc
gttgtgagcgaggatttcgatgcgcgcttcagtgcgctttcgcgcacctaccgctaccgc
atttgcgacgattacgcgcgccgcgaccctttgcgccgcgacgttgcctttcacaagcgc
cctctcgatgcagaggcgatgcacaatgcggcccgcgcgctcgttggcgaacatgatttt
ctctccttctgcaaaccccgcgaggatgccacgacaatccgcacccttcacgcggtcacg
tgggagcgcccgaacacaggcaaggatgaggggctcgtcgtcgccaccgtcacggccgac
gccttctgccaccacatggtccgctccatcgttggtgcgagcgttgccgtgggggagcat
cgcctcgacgccgagtggatggcagccctcgtgacgattccgcgccgtgatgaagcggga
agcgcgcccatgttctctcccacgggcctcacgctcgagggcatcgagtatccggaggag
tcggcttgggctgctcgcgccacccaaacgcgcggcaagcgcggggtgccattcacgcgc
gggtga

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