Dermabacter vaginalis: DAD186_09290
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Entry
DAD186_09290 CDS
T04434
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
dva
Dermabacter vaginalis
Brite
KEGG Orthology (KO) [BR:
dva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dva03016
]
DAD186_09290
Enzymes [BR:
dva01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
DAD186_09290
Transfer RNA biogenesis [BR:
dva03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DAD186_09290
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ANP27479
UniProt:
A0A1B0ZHL4
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All DBs
Position
complement(1056819..1058069)
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AA seq
416 aa
AA seq
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MTDANAQATETASAPLIKKPAGGTPALVATIQGILEWCERVESGEDLAIDVERASSYRYS
AKAYLVQIKTEAAGILLLDPLACQLPGTFTDIMNSHPWILHASRQDLPSLSMLGLTPPAL
FDTEVAARLLGLPKVNLGALTEELLGVRLAKEHSSANWSKRPLPESWLDYAALDVEYLAE
LKAALTRRLDESGKAAWAQEEFAFEATFAHPDTPDEPWRSLHGLGTLKSPLQLAVARAMW
ERRDSIARHADIAPFMVLRDKPLVAMAKASSKGREAFDKAAPKNLKHREQWWRCVREARE
LPRVHLPSTRPAGPYPNHRSWPKRFPEVLGAYKKVREGLLARADELHMPVENLISPGHVR
HWVWNHFNAEAEHRIPHASPEQIERELEAVGARPWQAAQATPAIIESLRDYTPPST
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgcgaacgctcaggcgacggaaaccgcatccgcgcctctcattaagaagccc
gcgggaggaactccagctctcgtggcgaccatccagggcatcctcgagtggtgcgagcgc
gttgaaagcggcgaggaccttgcgatcgatgtcgaacgggcctcgagttaccggtattcc
gcgaaggcctacctcgtgcagatcaaaaccgaggcagccggaattttgctgctcgatccg
ctcgcgtgccaactcccgggaactttcacggacatcatgaactctcacccgtggattctg
cacgcctctcgacaagaccttccctcactctcgatgctcgggctgacaccacccgcgctt
ttcgacaccgaggtcgccgccagacttctgggactgcccaaggtgaatcttggcgccctc
accgaagaactgctcggcgtgcggctcgccaaggagcattcgagcgcgaattggtcgaag
aggccgcttccggaatcatggctcgactatgccgcactcgatgtggaatacctcgccgag
ctcaaggctgctctcacgcggcggctcgacgagagcggtaaagccgcatgggctcaagaa
gaatttgcgttcgaagcaacatttgcgcaccccgacacacccgacgagccgtggcgcagc
ctgcacgggctcggtactctcaaaagcccgcttcagctggcggtcgcacgtgcgatgtgg
gagcgacgcgattcgattgcccgtcatgccgatatcgcgccgttcatggtgcttcgcgat
aaaccactcgtggccatggcgaaggcctcgagcaaaggccgcgaagcattcgacaaggcg
gcaccgaaaaatctcaagcatcgcgagcagtggtggcgatgcgtacgcgaagcacgcgaa
cttccccgcgtgcacctcccctcaacgcgacccgcgggcccctaccccaatcaccggtcg
tggccgaagcgtttcccagaggttctcggcgcctacaagaaggttcgtgaagggcttctt
gcgcgcgccgatgaactacacatgccggtcgagaatctcatttctcccggccatgtgcgc
cactgggtgtggaatcacttcaacgccgaggcggaacaccgtatacctcacgcaagcccc
gaacagatcgagcgcgaactcgaggccgtaggcgcgcggccgtggcaggctgcacaagcg
acacccgcgatcatcgaatcgctgcgcgattacacacctccgagcacctag
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