Dermabacter vaginalis: DAD186_12080
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Entry
DAD186_12080 CDS
T04434
Name
(GenBank) DNA topoisomerase (ATP-hydrolysing)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
dva
Dermabacter vaginalis
Brite
KEGG Orthology (KO) [BR:
dva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dva03032
]
DAD186_12080
03400 DNA repair and recombination proteins [BR:
dva03400
]
DAD186_12080
Enzymes [BR:
dva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DAD186_12080
DNA replication proteins [BR:
dva03032
]
Prokaryotic type
DNA Topoisomerases
DAD186_12080
DNA repair and recombination proteins [BR:
dva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DAD186_12080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Lzipper-MIP1
Motif
Other DBs
NCBI-ProteinID:
ANP27758
UniProt:
A0A1B0ZIH9
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Position
1356250..1358811
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AA seq
853 aa
AA seq
DB search
MRALLRLAVLVPCDDSTFATSPVYGIDAGTMVRMASRTSTPAPEPIKENIVDIDVTSEME
TSFLEYAYSVIYSRALPDARDGLKPVQRRILYTMDNMGLRPDKGHVKSQRVVGDVMGKLH
PHGDSAIYDALVRLAQDFNMRLPLVDGHGNFGSLDNGPAAARYTEARMAKAALLMTASLD
EDVVDMVPNYDNQLLQPEVLPVQYPNLLVNGASGIAVGMATNMAPHNLVEVIAAARHLLD
HPEATLEDLMRFVPGPDLPSGGRIVGLGGIRDAYETGRGTFKIRATTKVENVTSRKKAIV
VTELPYQVGPEKIAEKLRDAVQAKKVQGISDYQDLSDRKHGMRLVLTLKSGFNPEAVLQQ
LYKHTPMEDSFGINNVALVNGQPRTLGLKPLLRVFLDHRIDVVRRRTEFRLGKRRDRLHL
VKGLLIAIVDIDEVIQIIRSSDTVESARERLMTVFDLSSAQAEYILELRLRRLTKFSRLE
LEAERDELERDIAELLEILSEESALHRVVSAELQQVAEEHGTARRTILLEADAAKAKATP
ASLEIEDSPCDVLLSGTGLVARVPQRTPLGADAHTRSQHDVILARVSTTTRSVIGAVTDL
GRLHHVDVVDLPALAPSAGSSSIAGGTRLADLLSLEKDEKVVGLVRLELPEGETDRGGIA
LGTANGVVKRVNRDFPKSDGFDIVTLKGGDRVVGVVDMLDDADMDLAFITSHAHLLHFPA
SGVRAQGRGGSGVAGIKLGEGDRVIGFGAFDVTKPGEVVTVAGSSSALDGVQSGSLKVSA
ASEYPAKGRATGGVRCHRFLRGEDTLISAWIVNAPALACSDAGAPIDLPSPIARRDGSGS
PLTLPIAAVGSLS
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgcccttttgcgcctcgccgtcctcgtgccatgtgacgattctacgttcgccacc
tcccccgtatatgggattgacgctggcacaatggtgcgcatggcctcacgtacatccacg
cccgcaccggagccgattaaagaaaacatcgtcgacatcgacgtcacgagcgagatggag
acgtccttccttgagtacgcgtattcggtgatctactcccgcgcgctccccgatgcgcgc
gacgggctcaaaccggtccagcgcaggattctctacacgatggacaacatggggctccgc
ccagacaaggggcacgtgaagagccaacgcgtcgttggcgatgtcatgggcaaactccat
ccccacggtgactccgcgatttatgacgccctcgtgcgtctcgcccaagacttcaacatg
cgcctgcctctcgtcgacggccacggcaactttggctcgctcgacaacgggcccgcggcg
gcacgctacaccgaggcgcgcatggcgaaggccgcgcttctgatgacggcctccctcgac
gaagacgtcgtcgacatggtgccgaactacgacaaccagcttctccagccggaagttctt
cctgtccagtacccaaacctgctcgtcaacggcgcctcgggtatcgcggtgggcatggcc
accaacatggctccccacaacctcgtagaggtcatcgcggcagcgcggcacctcctcgat
caccccgaggccacgctcgaagatctcatgcgcttcgttcctggcccggacctcccaagc
ggcgggcgcatcgtggggctcgggggcattcgcgatgcctacgagaccggacgcggtacc
ttcaagattcgcgcaaccacgaaggtcgaaaacgtcacgagtcgcaaaaaagcgatcgtc
gtgaccgaacttccctatcaggttggccccgagaaaatcgcggagaaacttcgcgacgcc
gttcaggcgaagaaagtccagggcattagcgactaccaggatctctccgaccgcaagcac
ggaatgcggctcgtgctcacgctcaagagcggtttcaacccggaggccgttcttcagcaa
ctgtataagcacacgcccatggaggattctttcggcatcaacaatgtcgcgctcgtgaac
gggcagccccgcaccctcgggctcaagccgctccttcgcgtgttcctcgaccaccgcatc
gacgttgttcgtcgccgcaccgagttccgtcttggtaagcgccgagaccgcctccacctc
gttaagggcctcctcatcgcgatcgtcgacattgacgaagttattcagatcattcgctcc
tccgacaccgtcgagagcgcacgcgagcgtctcatgacggtctttgacctctcgagtgcc
caggctgagtacattcttgagctgcgccttcgccgcctcaccaagttctcgcgcctcgag
cttgaggcggagcgagacgaactcgagcgcgacatcgccgaacttctcgaaatcctttcc
gaagagtccgcactgcaccgcgtcgtcagcgccgaattgcagcaagtcgcagaggaacac
ggcacggcgcgccgcacgatcctccttgaggccgatgccgcaaaggccaaagccaccccc
gcgagtctcgagatcgaggactcaccgtgcgacgtcctcctctccgggacaggcctcgtg
gcccgcgtcccccaacgcacgccccttggcgccgacgcccacacacgctcccagcacgac
gtgattctcgcgcgcgtcagcacgacgacgcgctcggtcatcggggccgttaccgacctc
ggccggctccaccacgtcgacgtcgtggacctccccgcgctcgctccctcggcgggctcg
tcttccatcgcgggtggcacgcgtctcgccgacctcctctctctcgagaaggacgagaaa
gtcgtgggcctcgtgcgcctcgaacttcccgagggcgaaaccgatagaggcggcatcgcg
ctcggtaccgcgaacggcgtcgtcaagcgtgtcaacagagacttccctaagtcggacggt
ttcgacatcgtgacgctcaagggcggcgaccgcgtcgtgggcgtcgtcgacatgctcgac
gatgccgacatggatctggcctttatcacctctcacgcgcatctcttgcacttccccgcc
tcgggtgtacgcgcccagggccgtggaggttccggcgtggcaggcatcaagctcggcgag
ggcgatagggtcattggctttggtgctttcgatgtcacgaagcccggcgaggtcgtgacc
gtcgccggttcgtcgagtgcgctcgacggtgtgcaatcgggctccctcaaggtctccgcc
gcatcggaataccccgcaaaaggacgcgcgacgggcggtgttcgctgtcatcgcttcctg
cgcggggaagacacgcttatctccgcgtggatcgtcaatgcgcccgcactcgcctgttcc
gatgccggcgcaccgatcgacctcccctccccgatcgcacggcgagacggctccggttcg
cctctcacgcttcccatcgcggcggttggttcactctcatga
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