Dermabacter vaginalis: DAD186_12370
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Entry
DAD186_12370 CDS
T04434
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
dva
Dermabacter vaginalis
Pathway
dva03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dva00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DAD186_12370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dva03019
]
DAD186_12370
03009 Ribosome biogenesis [BR:
dva03009
]
DAD186_12370
Enzymes [BR:
dva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DAD186_12370
Messenger RNA biogenesis [BR:
dva03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DAD186_12370
Ribosome biogenesis [BR:
dva03009
]
Prokaryotic type
rRNA helicases
DAD186_12370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Flavi_DEAD
AAA_19
CMS1
Motif
Other DBs
NCBI-ProteinID:
ANP27787
UniProt:
A0A1B0ZIQ2
LinkDB
All DBs
Position
1392095..1393981
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AA seq
628 aa
AA seq
DB search
MTTDSTDRTETALENREEIAEALEMDGMAAPSPDSVEDAPNATDAPEASHDDERVRFDEL
GLPPELLAAVRDLGFTHPSPIQERAIPALLEGRSVLGVAQTGTGKTAAFGLPLLAEVRAS
RSATQGLVLAPTRELAMQVAEAIHSFATKLDGVNVVSVYGGAPYGPQERALARGAHVIVG
TPGRVIDHLKRGNIVLDHLSTLVLDEADEMLRMGFAEDVDEILGFAPQKKRMALFSATMP
PAIKRVAEEHMPDAVSVAVARQSTTVTSVEQTYAVVPFRHKTGALTRIVETTDADATIVF
VRTRSAAEEVGTALIARGIVAATISGDVPQKERERIVERLRDGSLTVLVATDVAARGLDV
ERIGLVVNFDIPSEPEAYVHRIGRTGRAGRTGKALTFVAPHEKRKLRNIERTTRQELKEI
QIPSPLDVSRHKMKKVLAEVPGRLEKGRLNLYFDLLNEFLAENNVSVEQVAAALGAMTVG
DDGPRAHEDDFTGASFRDKGERGKGKDRNERRDRGEKRPRRSSAGFTTYRIAVGKNHGVR
PQSIVGAIAGEGGLNGQDVGKIDLFPSFSLVELRDGVDEAALARIGRARVGGKPMRIQVD
QGPKKGGKFKARKGRHFDDRGAKKSNRW
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgatagcaccgaccgcaccgaaaccgctctcgagaaccgcgaggaaattgcg
gaagcgctcgaaatggacggcatggcagctccgagccccgacagtgtcgaagacgcaccg
aacgcgaccgacgcccccgaagcctcccatgacgatgagcgcgtccgcttcgacgagctc
ggccttccgcccgagctgctcgccgccgtgcgcgacctcgggtttactcacccctccccc
attcaggaacgcgcaattccggctctgcttgaaggccgtagcgttttgggcgtcgcacag
acgggcacgggcaagaccgcagcattcggtctcccactcctcgcggaggtccgcgcctcg
aggagcgccacgcaaggactcgttctggcaccgacccgagagctcgcgatgcaggtggcc
gaggccattcattcatttgcgaccaagctcgatggcgtgaacgtcgtaagcgtgtacggc
ggtgctccctacgggccgcaggagcgcgccctcgcgcgcggcgcccacgtgatcgtcggt
acgcccgggcgcgtcatcgatcacctcaagcgcggcaacatcgtgctggatcacctctcg
acgctcgttctcgacgaggccgacgaaatgcttcgcatgggctttgccgaggacgttgac
gagattctcggtttcgctccacaaaagaagcgcatggcgctgttcagtgcaacgatgcca
cccgcaatcaagcgcgtcgccgaggagcacatgcctgacgccgtgagcgttgccgtcgcc
cgccagtcaacgaccgtgacgagcgtcgagcagacgtacgccgtggtgccattccgccac
aagaccggtgctctcacgcgcatcgtcgagacgaccgacgccgatgcgacgatcgtgttc
gtgcgcacgcgcagcgccgccgaggaagttggaacggcgctcattgcccgaggcatcgtc
gccgcaaccatctcgggtgacgtcccccaaaaggagcgtgaacgcatcgtcgagcgtctg
cgcgacggctctctcacggtgctcgtcgcgactgacgtcgccgcgcgcggtctcgacgtt
gagcgtatcggcctcgtggtgaactttgacattccctccgaacccgaggcctacgtgcac
cgtattggccgcaccggtcgcgcgggtcgcacgggtaaagccctcacattcgtggctccc
cacgaaaagcgcaagctgcgcaatatcgagcgcacgacccgccaggagctcaaagaaatt
caaatcccctcgccccttgatgtctcgcgtcacaaaatgaagaaggttctcgcggaggtt
cccgggcgcctcgagaaggggcgcctcaacctctacttcgatcttctcaacgagtttttg
gccgagaacaacgtctcggtcgagcaggttgccgcggctctcggagcgatgacggttggc
gacgacggccctcgcgcacacgaagacgacttcactggcgcgagcttccgcgacaagggt
gaacgcgggaagggcaaggatcggaacgaacgccgcgaccgtggggagaagcgtccccgc
cgttcgagcgcgggatttacgacctaccgcattgcggtgggcaagaatcacggggtgcgg
ccccagtcgattgtgggagccattgcaggtgagggcggcctcaacggccaggatgtgggg
aaaatcgatcttttcccgtcgttctcactcgtagagcttcgcgacggcgtcgacgaggct
gctctcgcgcgcattggtcgcgcccgagtgggcggcaagcccatgcgcatccaggtagat
cagggccccaagaagggcggcaagttcaaagctcgcaagggtaggcacttcgacgatcgc
ggcgcaaagaagtcgaatcgctggtag
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