KEGG   Dermabacter vaginalis: DAD186_16430
Entry
DAD186_16430      CDS       T04434                                 
Name
(GenBank) hypothetical protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
dva  Dermabacter vaginalis
Pathway
dva03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dva00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DAD186_16430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dva03019]
    DAD186_16430
Messenger RNA biogenesis [BR:dva03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DAD186_16430
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 YicC-like_C
Other DBs
NCBI-ProteinID: ANP28193
UniProt: A0A1B0ZJU3
LinkDB
Position
complement(1830877..1832568)
AA seq 563 aa
MTTPFSTKLGTPPKLKNNTLRVTPLGGLGEVGRNMTVFEYEGRLLIVDCGVLFPEEAQPG
VDLILPDFRSIEDRLDDVAAIVLTHGHEDHIGAVPYLLRLKPDIPLVGSQLTLAFVEAKL
REHRIKPYTLAVKEGDVEKFGAFECEFVAVNHSIPDALAVAIRTEAGTVLHTGDFKMDQL
PLDGRLTDLRAFARLGEEGVDLFLVDSTNAEVPGFTVKEREIGPVLDSLFARARQKIVVA
SFSSHVHRVQQVLDSAYAHGRKVAFVGRSMVRNMTIAADMGYLRVPPNTLIDLKKADDIP
DHKIVYMCTGSQGEPMAALGRIANRNHRVEVGEGDIVILASSLIPGNENDVFRVMNGLME
LGAEVVHQANARVHVSGHASEGELLYCYNILRPKNVMPVHGEVRHLIANGKIAQSSGIPR
ENIVLAKDGTVVDLKDGVARAVGEVEVGYVYVDGSSVGEVSEADLKDRRILAEEGFISLF
AVVNSETRELIAGPEIHSRGIAEDDEVFERIKPDIIKALHKAIEDEKGHDTHQLQQAMRR
VVGRFLSQRLRRKPMIIPVVVEA
NT seq 1692 nt   +upstreamnt  +downstreamnt
gtgactacacccttttccacgaaacttgggacccctccaaagctcaagaacaacaccctc
cgcgtgaccccactcggcggtctcggcgaggtcggccgcaacatgaccgtcttcgaatac
gaggggcggctcctcatcgttgactgcggcgtgctgttccccgaggaggcccagccgggc
gtcgacctcatcctcccggacttccgctccattgaggaccgtctcgatgacgtcgccgcc
atcgtgcttacgcacggccacgaagaccacatcggtgcggtgccataccttttgcgcctc
aagccggacatccctcttgtgggcagtcagctgacgctcgcgttcgttgaggcgaagctc
cgcgagcaccgcatcaagccgtacacactcgccgtcaaggaaggcgatgtcgagaagttc
ggcgcttttgaatgcgaattcgtcgccgtgaaccactcgatcccggacgcgctcgcggtc
gcgatccgcaccgaggccggtaccgtgctgcacacgggcgacttcaagatggaccagctc
ccgctggacggccgcctgaccgatcttcgcgcttttgcgcgacttggcgaagagggcgtg
gatctgttcctcgtggattcgaccaacgccgaggtccccggcttcacggttaaggaacgc
gaaatcggccccgtgctcgatagtctctttgcgcgtgcacggcagaagatcgtcgtcgcg
agcttctcgagccacgttcaccgcgtgcagcaggtgctcgattcggcgtacgcgcacggg
cgcaaggtcgcctttgtgggccgctcgatggtacgcaacatgacgatcgcggctgatatg
ggctacctcagggttcccccgaacacgctcatcgacctcaaaaaagccgatgacattccc
gaccacaagatcgtgtacatgtgcacgggcagccagggtgagccgatggcggcgctcggg
cgtatcgcgaaccgtaaccaccgcgtcgaggtgggggagggagacatcgtcatccttgcc
tcctcgctcattccgggcaatgaaaacgatgtcttccgcgtgatgaatggactcatggag
cttggcgccgaggtcgtgcaccaggccaatgcacgcgtgcatgtctccggtcacgcgagc
gaaggcgaactgctctactgctacaacatcctgcgcccgaagaacgtgatgcccgtgcac
ggcgaggtgcgacacctcatcgcgaacggcaaaatcgcgcagtcgtcgggcatcccgcgc
gagaacatcgtgctcgcgaaggacggcacggtcgtggacctcaaggatggcgtagcgcgc
gcggtcggtgaggttgaggtcggctacgtgtacgtggacggctcgagtgtgggcgaagtg
agcgaggccgatctcaaggatcgccgcatcctcgccgaagaaggcttcatttccttgttc
gccgtggtcaatagtgaaacgcgcgagcttattgccgggcccgagatccactcgcgaggc
atcgccgaggacgacgaggtgtttgagcggatcaagcccgacatcatcaaggcacttcac
aaggcgatcgaagacgagaagggccacgacacgcatcagcttcagcaggcgatgcggcgc
gtcgtgggtcgcttcctctcgcagcgccttcgccgcaagcccatgattattcccgtggtc
gtcgaggcctga

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