Dermabacter vaginalis: DAD186_16560
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Entry
DAD186_16560 CDS
T04434
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dva
Dermabacter vaginalis
Brite
KEGG Orthology (KO) [BR:
dva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dva03016
]
DAD186_16560
Enzymes [BR:
dva01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DAD186_16560
Transfer RNA biogenesis [BR:
dva03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DAD186_16560
Prokaryotic type
DAD186_16560
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ANP28206
UniProt:
A0A1B0ZJS8
LinkDB
All DBs
Position
complement(1845194..1846177)
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AA seq
327 aa
AA seq
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MSKKHAGEGPHGFLLLDKPAGLTSHDLVARVRYHLNTRKVGHAGTLDPAATGLLLLGVGY
GTKLLTYAVGLDKTYEATIRLGHATVTDDAEGEQVGQAAPENKLRAILDEYASLENAIAD
LTGDIAQVPSAVSAIKVNGVRSYARVRGGESVELAARPIRVDRFEIREARMTEGFLDVDC
VVDCSSGTYIRALARDLGAALGVGGHLTALRRTRVGGFTVEAAQLIPERDAPRAAEDPSA
ALTLTPLGKAALSFLPLHAVSESEATALRHGQWIEASQASDPEAFPAAAIVPPTGELVAI
VEPAPKRGLLKSASVIPRFSSAPVPRS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaaacacgcgggggaggggcctcacggcttccttctcctcgacaagcccgcg
ggccttacgagccacgacttggtcgcccgagtgcgctatcacctcaacacgcgcaaggtg
ggtcacgcgggaacgcttgaccccgccgcgacggggctgcttctcctcggcgtggggtac
ggcacgaagcttctgacctacgccgtggggctcgacaaaacctacgaagcgacgatccgc
ctcggccacgcgacagtgacggacgatgccgagggcgaacaggtggggcaggcagccccg
gagaacaagctgcgcgcaatcctcgatgagtacgcgtcgctcgagaacgctattgccgac
ctcacgggagatatcgcgcaggttccgagcgccgtgagcgcgattaaggtcaacggtgta
cgctcgtacgctcgcgtacgcgggggagagagcgttgagctcgccgcgcgcccgattcgg
gtggaccgtttcgagattcgtgaggctcgcatgacggaaggatttctcgacgtcgactgc
gttgtggactgcagttcgggaacctacatacgtgctctcgcacgcgacctcggtgcagct
ctcggcgtgggcggccatctcacagcgctcaggcgcacgcgcgttggcggattcaccgtt
gaggcggcacagctcatccccgagcgagacgcgccgcgtgccgcggaggacccttcggcg
gcgctcacactcactccgcttggcaaggccgccctctcattcttgccgcttcacgccgta
agcgagagcgaagcaacagcgctcagacacgggcagtggattgaggcgtctcaagcgtct
gaccccgaagccttccctgccgctgccatcgtgccgcccacgggtgagctcgtggcaatc
gtcgaaccagcccccaagagggggctgctcaagagcgcgagcgttattccgcgcttctca
agcgcgccggttccccgtagttag
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