Dermabacter vaginalis: DAD186_19660
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Entry
DAD186_19660 CDS
T04434
Name
(GenBank) serine-tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
dva
Dermabacter vaginalis
Pathway
dva00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dva00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DAD186_19660
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dva01007
]
DAD186_19660
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dva03016
]
DAD186_19660
Enzymes [BR:
dva01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
DAD186_19660
Amino acid related enzymes [BR:
dva01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
DAD186_19660
Transfer RNA biogenesis [BR:
dva03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DAD186_19660
Prokaryotic type
DAD186_19660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
LidA_Long_CC
GNAT_C
FloA
Motif
Other DBs
NCBI-ProteinID:
ANP28516
UniProt:
A0A1B0ZKP4
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All DBs
Position
complement(2185345..2186604)
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AA seq
419 aa
AA seq
DB search
MIDLRLLRENPDRVREAQKARRRDPKTVDAVLEADQAWREATQSFESLRAEQKSFGKKVA
QAKGEEKQKLVAEAKELSQKVKDLEQRAGEAEEAREKALRAIPNIAEGAPEGLEEDFEVR
ETHGEIPSFDFEVRDHLDIAEKLKAIDMQRGAKVSGSRFYFLTGVGAQLELAILNAALDK
ATRAGFTPVITPTLVLPETMDGTGFLGEHADEVYHLDKDDDLYLVGTSEVALAGYHRDEV
LDLDNGPLRYAGWSACYRREAGSYGKDTRGIIRVHQFHKVEMFSYCKLEDSYEEHERLLG
MEREMMDLIDVPYRVIDTAAGDLGTSAARKFDCEAWVPSQNTYRELTSTSNCTQFQARRL
NIRERVDGALRPVATLNGTLGTTRFIVALLENHQQADGSVVVPEGLRPYLGGREVFEVQ
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatctgcgactgctccgtgagaatcccgaccgcgtgcgcgaggcccagaaggcg
cgccgccgcgaccccaaaactgttgacgccgtgctcgaagccgaccaggcctggcgtgag
gccacgcagtcgtttgagtcgctgcgtgccgaacagaaatccttcggtaagaaagtcgcc
caggccaaaggtgaggaaaagcagaagctcgttgccgaggcgaaggagctgagccagaag
gttaaggacctcgaacagcgcgcaggtgaagctgaggaggcgcgcgagaaggcgctgcgt
gcgatccccaacatcgcggaaggcgccccagaagggctcgaagaggactttgaggttcgc
gagacccacggcgagatcccgagcttcgacttcgaggtgcgcgatcacctcgacatcgcc
gagaagctcaaggcgatcgacatgcagcgtggcgcgaaggtttccggctcgcgtttctac
ttcctcaccggggtgggtgcgcaacttgagctcgcgatcctcaacgccgccctcgacaag
gcgacgcgcgcgggcttcacgcccgtcatcacgcccaccctcgtcctacctgaaacgatg
gatggcaccggcttcctcggcgagcacgccgatgaggtctaccacctcgacaaggacgac
gacctctacctcgtcggcacgagcgaggtcgcgctcgcgggctatcaccgcgacgaagtt
ctcgacctcgacaatgggcccctgcgctacgccgggtggagtgcgtgctaccgccgcgag
gcgggcagctacggcaaggatacgcgcggcatcattcgcgtgcaccagttccacaaggtc
gagatgttttcctactgcaagctcgaggactcctacgaggagcacgagcgtttgctcggc
atggagcgcgagatgatggacctcatcgacgtgccctaccgcgtgatcgacaccgccgcg
ggcgacctcggcacatccgccgcccgcaaatttgattgtgaagcgtgggtgccgagccag
aacacgtaccgcgagctcacctcaacctcgaactgcacgcagttccaggcacgtcgcctc
aacatccgcgagcgagtggacggggcgctgcgcccggtcgcaaccctcaacggcacgctg
ggcacgacccgctttatcgtcgcgctgctcgagaatcaccagcaggccgacggcagcgtc
gtggttcccgaagggctgcgcccctacctcggcggccgcgaagtcttcgaggttcaatga
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