Dactylosporangium vinaceum: Dvina_05280
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Entry
Dvina_05280 CDS
T07478
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dvc
Dactylosporangium vinaceum
Pathway
dvc03420
Nucleotide excision repair
dvc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dvina_05280
03430 Mismatch repair
Dvina_05280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dvc03400
]
Dvina_05280
Enzymes [BR:
dvc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dvina_05280
DNA repair and recombination proteins [BR:
dvc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dvina_05280
MMR (mismatch excision repair)
Other MMR factors
Dvina_05280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
Complex1_LYR_1
DUF6484
Motif
Other DBs
NCBI-ProteinID:
UAC01489
LinkDB
All DBs
Position
1148578..1150683
Genome browser
AA seq
701 aa
AA seq
DB search
MLAGLDRDQSIAVTAPAGPLCILAGAGTGKTRAITHRIAHRVRSGQVRGQHVLAVTFTAR
AAAEMRERLGKLGAEGVQARTFHAAALRQVRYFAPRLFSGRPMPELLDSKARLVGLAATK
AGLKTDREVSRDLASEIEWAKASLIEPDDYAAAAAKALREPPFDAALVAKVYAHYERAKR
AQGVIDFEDMIRAAIWAVEEHPDVAEQVRAQYRHFVVDEYQDVNPMQQRLLEAWLGGRED
VTVVGDASQTIYSFTGASASYLVDFQRRHPRATVVRLTRDYRSTPQVVGLANAVISRARG
ELSRLRLELVGQRPPGPEPTVRTFADEPEEAAAVAARCAELIAAGTPAREIAVLFRVNAQ
SEVYQEALAEAGVPYVVHGTERFFERTEVREAMIALRSYRGEDEGGLVPTVHAALARTGW
MPDSAPAGGAQRERWEAVSALVSLAEGMAGGGAASLDEFNTELQRRAAVQHVPTVEGVTL
SSLHSAKGLEWDAVFLVGLTEGTLPVIHARTPDAVEEERRLLYVGVTRARHTLWLSHAAA
RTPGGRPRRQSRFVPSSTPPSGAGQSGNGGPGYPRRPLDKAAIAGKARRVMAVSCRVCGT
GLVNGADRKLGRCSTCPSDLDEDLLARLQDWRARLAAIQKVPAFVIFTDVTLAAIAERRP
GRREELAAIAGIGPRKLMLYGDDVVALVGGTSVDALARDSD
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
attctcgcgggactggaccgggaccagtccatcgcggtgaccgccccggcggggcccctg
tgcatcctcgccggtgcggggacgggcaagaccagggcgatcacgcaccggatcgcccat
cgggtgcgctccgggcaggtccggggccagcacgtcctcgccgtcacgttcaccgcgcgg
gccgccgccgagatgcgggagcggctggggaagctgggggccgagggggtgcaggcgcgg
accttccatgcggcggcgctgcggcaggtgcggtacttcgcgccccggctcttctccggc
cggcccatgcccgagctcctcgacagcaaggcccgcctggtcggcctggccgcgacgaag
gccgggctcaagaccgaccgggaggtctcgcgagacctggccagtgagatcgagtgggcc
aaggcgtcgctcatcgagccggacgactacgcggcggccgcggccaaggcgctgcgcgag
ccgccgttcgacgcggccctggtcgcgaaggtgtacgcgcactacgagcgggccaagcgg
gcccagggcgtgatcgacttcgaggacatgatccgggccgcgatctgggccgtcgaggag
caccccgacgtcgcggagcaggtgcgcgcgcagtaccggcacttcgtcgtggacgagtac
caggacgtcaacccgatgcagcagcgcctgctcgaggcgtggctcggcggccgcgaggac
gtgacggtcgtcggcgacgccagccagacgatctactcgttcaccggggcgagcgcgtcg
tacctcgtcgacttccagcgccgccacccgcgcgccaccgtcgtgcggctgacccgtgac
taccgctccaccccgcaggtcgtcggcctggccaacgcggtgatctcccgggcccgcggc
gagctgtcgcggctgcggctggaactggtcggccagcgcccgcccgggcccgagccaacg
gtgcgcacgttcgccgacgagcccgaggaggcggcggcggtcgcggcccgctgcgcggag
ctcatcgcggccgggacgccggcccgggagatcgccgtgctgttccgggtcaacgcgcag
tccgaggtgtaccaggaagcgctggccgaggccggcgtgccctatgtggtgcacgggacg
gagcgcttcttcgagcgcaccgaggtgcgggaggcgatgatcgccctgcgctcgtaccgc
ggcgaggacgagggcggcctggtcccgaccgtccacgcggcgctcgcccgcaccggctgg
atgcccgactccgcacccgccggcggtgcccagcgcgagcggtgggaggcggtcagcgcg
ctcgtcagcctggccgaaggcatggcgggcggcggcgcggcctcgctcgacgagttcaac
accgaactgcagcggcgggcggccgtccagcacgtgccgacggtcgagggcgtgacgctc
tcgtcgctgcactcggcgaaggggctggagtgggacgcggtgttcctggtcggcctgacc
gagggcacgctgccggtgatccacgcccgcaccccggacgcggtcgaggaggagcgccgg
ctcctgtacgtcggggtgacccgcgcccgccacacgctctggctgtcgcacgccgccgcc
cgcacgcccggcggccggccgcgccgtcagagccgcttcgtgccgtcgtcgacgcccccg
agcggcgccggtcagagcggcaacggggggcccggctacccgcggcggccgctcgacaag
gccgccatcgccggcaaggcccgccgcgtcatggccgtctcctgccgggtgtgcgggacg
ggcctggtcaacggggccgaccgcaagctcgggcggtgctcgacgtgcccgtcggacctc
gacgaggacctgctggcccggctgcaggactggcgggcccggctggccgcgatccagaag
gtgccggcgttcgtcatcttcaccgacgtgacactggcggcgatcgccgagcggcgcccg
gggcggcgcgaggagctggccgcgattgcggggatcggcccgcggaaactgatgctctac
ggcgacgacgtcgtcgccctggtcggcggcacgagcgtcgacgccctggcccgcgacagc
gactga
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