Dactylosporangium vinaceum: Dvina_08650
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Entry
Dvina_08650 CDS
T07478
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dvc
Dactylosporangium vinaceum
Brite
KEGG Orthology (KO) [BR:
dvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dvc03016
]
Dvina_08650 (truB)
Enzymes [BR:
dvc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Dvina_08650 (truB)
Transfer RNA biogenesis [BR:
dvc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Dvina_08650 (truB)
Prokaryotic type
Dvina_08650 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
ThiC_Rad_SAM
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UAB98140
LinkDB
All DBs
Position
1986405..1987307
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AA seq
300 aa
AA seq
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MVSRMAQKTATAGGLVVVDKPGGMTSHDVVSRMRRLARTRRVGHGGTLDPMATGVLIVGV
EKATRLLTYVIGSTKQYTATIRLGESTITDDAEGEVVARADASTLTDLEIETGLTPLRGD
ILQVPSSVSAIKVNGVRSYHRVRSGEEVALAARPVTVSRLDVLALRRAGTHVDLDVDVAV
SSGTYIRALARDLGAALGVGGHLTALRRTAVGNFTLAEAATLDELAMREDPVTMPLPAAA
DRCFPRRDATAEEAKTLSHGGPLTAIGLTDPYAVFAPDGTVLAIVQERDGKARPEIVLVP
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcgcgcatggcgcagaagacggcgaccgcgggcggcctcgtcgtcgtcgacaag
cccggcggaatgacctcgcacgacgtggtgtctcgcatgcgccgcctcgcgcggacgcgg
cgggtcggccacggcggcaccctggacccgatggccaccggcgtgctcatcgtgggcgtg
gagaaggcgacgcggctgctcacgtacgtgatcgggagcacgaagcagtacaccgcgacg
atccgcctcggcgagtccacgatcaccgatgacgccgagggtgaggtcgtcgcccgcgcg
gacgcgtcgaccctgaccgatctcgagatcgagaccggcctgaccccgctgcggggcgac
atcctccaggtgccgagctcggtgtcagcgatcaaggtgaacggcgtccgctcctaccac
cgcgtccgctccggcgaggaggtggcgctggcggcccgcccggtgaccgtgtccaggctg
gacgtgctggcgctgcgccgcgcgggcacgcacgtcgacctggacgtggacgtagccgtg
tcctccggcacctacatccgagccctggcccgcgacctgggcgccgcactgggcgtgggc
ggccacctcacggcgctgcggcgaaccgcagtaggcaacttcaccctggccgaagcggcg
acacttgacgaactggccatgcgcgaggacccggtcacgatgcccttgccggccgccgcc
gaccgctgcttcccgcgccgcgacgccaccgccgaagaggccaagaccctgtcccacggc
ggccccctgaccgcaatcggcctcacggacccgtacgccgtcttcgccccggacggaacc
gtcctggcgatcgtccaggaacgcgacggcaaagcccgcccagagatcgtcctcgtcccc
taa
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