Dactylosporangium vinaceum: Dvina_08885
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Entry
Dvina_08885 CDS
T07478
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
dvc
Dactylosporangium vinaceum
Pathway
dvc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dvc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dvina_08885 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvc03019
]
Dvina_08885 (rny)
Messenger RNA biogenesis [BR:
dvc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Dvina_08885 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
UAB98181
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Position
2045914..2047695
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AA seq
593 aa
AA seq
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MTGVEVALTLAMILLVVVVAVVLVVAMKVVKRLGNGGPGAAAVGDDPAFLAEKDRQEHSL
ASLRTAAEDATAAVDEARAAAAAARTEAAAAKAEASAARSEARRILDAARAEADSLIERA
HRQAETDAEQARAAARRAGEREVSQLTTVAKEQSQDAERRQRRLDERERLLAEEAERLAE
RDRRITSTEAEFLEREASFVRRESALAEGEERHRAELERIAGLTADAARIEVVETIEAQA
KREAALLVRDIEHDARSTAEQRARHIVVDAIQRVASEQTAESVVSVLHLPSDEMKGRIIG
REGRNIRAFESTTGVNLIIDDTPEAVLLSCFDPVRREIGRLTLEKLVLDGRIHPHRIEEV
FEQAKHEVERLCHRAAEDALVEVGITDLHPELMTLLGRLRYRTSYGQNVLKHLVETAHIA
GIMASELHLDPVLIKRSAFLHDIGKALTHEVEGSHALIGADVARKYGEHEDVVHAIEAHH
NEVLPQTIEAVLTQASDACSGGRPGARRESLEAYVKRLERIEEIAGGKSGVEKVFAMQAG
REIRVMVRPDDVDDIGAAVLARDVAKQIEEELTYPGQIRVTVVRESRVTEIAR
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggggttgaggttgcgctcacgctggcgatgatcctgttggtcgtcgtcgtcgcg
gtggtgctcgtcgtcgcgatgaaggtcgtgaagcggctcgggaacggtgggccgggcgcc
gcggcggtcggggacgacccggcgttcctggccgagaaggatcggcaggagcattcgctg
gcgtcgttgcgtacggccgcggaggacgcgacggcggccgttgacgaggctcgggcggcg
gctgcggcggcgcgtaccgaggcggcggcggccaaggccgaggcgagcgcggctcgctcg
gaggcgcggcggatcctcgacgcggcccgggccgaggccgactcgctgatcgagcgggcg
caccggcaggccgagaccgatgccgagcaggcgcgggcggcggcgcgacgggccggtgag
cgggaggtcagccagctcacgaccgtcgccaaggagcagtcgcaggatgccgaacggcgg
caacgccggctcgacgagcgcgagcggctcctggcggaggaggccgagcggctggcggaa
cgggatcggcggatcaccagtacagaggcagagtttttggagcgtgaagcgtctttcgtc
cgccgggagtcggcgcttgccgagggcgaggagcggcaccgcgccgaactggagcgcatc
gccgggctcaccgccgacgcggcccggatcgaggtcgtcgagacgatcgaggcgcaggcc
aagcgcgaggcggcgctgttggtgcgcgacatcgagcacgatgcgcgcagcacggccgag
cagcgggcccggcacatcgtcgtcgacgcgatccagcgcgtggccagcgagcagaccgcg
gagagcgtcgtcagcgtcctgcacctgcccagcgacgagatgaagggccggatcatcggg
cgcgagggccgcaacatccgggcgttcgagtcgacgaccggcgtcaacctgatcatcgac
gacacccccgaggccgtgctgctgtcctgcttcgacccggtgcgccgcgagatcggccgg
ctcacgctggagaagctggtgctcgacgggcggattcacccgcaccgcatcgaggaggtc
ttcgagcaggccaagcacgaggtggagcggctgtgccaccgggccgccgaggatgcgctc
gtcgaggtcggcatcaccgacctgcaccccgagctgatgacgctgctggggcggctgcgg
taccgcacctcgtatggccagaacgtcctgaagcacctcgtcgagaccgcgcacatcgcc
gggatcatggcgtccgagctgcacctggacccggtcctgatcaagcggtcggcgttcctg
cacgacatcggcaaggcgctcacccacgaggtcgagggcagccacgcgctgatcggtgcg
gatgtggcccgcaagtacggcgagcacgaagacgtcgtccacgccatcgaggcccaccac
aacgaggtgctgccgcagacgatcgaggcggtgctcacccaggcttcggacgcctgctcg
ggcggtcggccgggggcgcggcgggaaagcctggaggcgtacgtcaagcggctcgagcgg
atcgaggagatcgccggcggcaagtcgggcgtcgagaaggtcttcgccatgcaggccggc
cgcgagatccgggtcatggtccgcccggacgacgtcgacgacatcggggccgcggtgctg
gctcgcgacgtggcgaagcagatcgaggaggagctgacctatccgggtcagatccgggtg
actgtcgttcgcgagtcgcgggtcacggagatcgctcgctga
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