Dactylosporangium vinaceum: Dvina_09360
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Entry
Dvina_09360 CDS
T07478
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
dvc
Dactylosporangium vinaceum
Brite
KEGG Orthology (KO) [BR:
dvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dvc03016
]
Dvina_09360
Enzymes [BR:
dvc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Dvina_09360
Transfer RNA biogenesis [BR:
dvc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Dvina_09360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
UAB98269
LinkDB
All DBs
Position
complement(2151692..2152966)
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AA seq
424 aa
AA seq
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MTDEPPVRRRDEEADSPDIPDPKTEPVLLTAPRDGTPEPIVDRAELARAVERFAAGTGPV
AVDAERASGYRYTHRAYLVQLRRAGAGTVLIDPLPFGQLPELDEVISPTEWILHAASQDL
PCLTELGLRPTRLFDTELAARLCGFERVGLAALTESLLGYTLEKHHSAADWSTRPLPTSW
LTYAALDVELLLQLREILVEELAKQGKTEWAAQEFAALVASAGDPPRVRADPWRRTSGIH
RVRGARALARVRALWTARDEIAQRRDASPGRVLADAAIIAAAEADPKDERALLALAGFGG
RSVRRLAPTWLTALSDARALSDKELPTTPPSEGPPPPHRWAERDPVAAARLARCRELVTG
LAAAHHLPPENLITPDSVRRLAWSPPEELSEEAVAAVLSGYGARPWQVALVSPGLTQALT
TPAE
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgaaccccccgtgcggcgtcgggacgaagaggcagacagtccggacattccg
gacccaaagaccgagcccgtcctgctgaccgccccccgagacgggacccccgagccgatc
gtggaccgggccgagctggcgcgcgccgtcgaacggttcgccgccggcaccggcccggta
gccgtcgacgccgagcgcgcctccggctaccgctacacccaccgcgcctacctggtgcag
ctgcgccgggccggcgccggcaccgtcctcatcgacccgctcccgttcggccagctgccg
gagctcgacgaggtgatctcgcccacggagtggatcctgcacgccgccagccaggacctc
ccgtgcctgaccgagctgggcctgcgcccgacccgcctgttcgacaccgagctggccgcc
cgcctgtgcgggttcgagcgggtcgggctggccgcgctcaccgagagcctgctcgggtac
accctcgagaagcaccactcggccgccgactggtcgacgaggcccctgccgacctcctgg
ctgacgtacgcggccctggacgtcgagctgctgctgcagctgcgcgagatcctcgtcgag
gagctggccaagcagggcaagaccgaatgggccgcccaggagttcgccgccctcgttgcc
tcggccggcgaccccccgcgggtccgggccgacccgtggcggcgcacctccggcatccac
cgggtccgcggcgcccgcgccctggcccgcgtccgcgcgctctggaccgcccgcgacgag
atagcccagcgccgggacgcctccccgggccgggtcctggccgacgccgccatcatcgcc
gccgctgaggcggacccgaaggacgaacgcgccctcctggccctggccggcttcggcggc
cgctcggtgcgccggctggccccgacctggctgaccgccctctccgacgcccgggccctc
tcggacaaggagctgccgaccactcccccctcggagggtccgcccccaccccaccgctgg
gccgagcgcgacccggtcgccgccgcccgcctagcccggtgccgcgagctggtcaccggc
ctggcggcagcgcaccacctgcctccggaaaacctcatcaccccggattcggtacggcgg
ctggcctggtccccgccggaggagctctccgaggaggccgtggccgcggtcctctccggc
tacggcgcccgcccctggcaggtggccctggtctcccccggcctgacgcaggccctgacg
accccggccgaatag
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