Dactylosporangium vinaceum: Dvina_10050
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Entry
Dvina_10050 CDS
T07478
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
dvc
Dactylosporangium vinaceum
Pathway
dvc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dvina_10050 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dvc03400
]
Dvina_10050 (uvrA)
DNA repair and recombination proteins [BR:
dvc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dvina_10050 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dvina_10050 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
AAA_29
RsgA_GTPase
AAA_21
AAA_23
AAA_16
AAA_25
AAA_22
APS_kinase
DnaJ_CXXCXGXG
nSTAND1
NACHT
Viral_helicase1
cobW
NTPase_1
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
UAB98396
LinkDB
All DBs
Position
2301339..2304491
Genome browser
AA seq
1050 aa
AA seq
DB search
MSDRLIIRGAREHNLRDVSLDLPRDAMIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLYARVGEPH
CPVCGELITKQTPQQIVDRVLAMEEGTRFQVLAPVVRGRKGEYIDLFAELQSKGYARARI
DGVVHPLTEPPKLKKQEKHTIEVVVDRLAVKKSAKQRLTDSVETALKLAAGIVILEFVDV
PEGDEHRERLFSEHLACPNEHPLSIEDLEPRSFSFNAPYGACPDCTGIGTKKEVDPELII
PDPERTLRDGAVAPWATGHTLDYFLRLLEALGDEEGFNLDTPWQGISSRGQKAILYGSDD
QVHVRYRNKYGRERSYYTGFEGVVQWIERRHADTESDWSRDKYEGYMRDVPCGTCGGTRL
KPEILAVTIDGRSIAEVCNLSVGECADLLGQMELTDRQKMIAERVLKEINARLRFLVDVG
LDYLSLDRASGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRL
KTLGNTLIVVEHDEDTIRTADWIVDIGPGAGEHGGRVVHSGPYEGLIASEESVTGAYLAG
RRSIPTPEIRRPRTPGRELVVVGAREHNLHNLTVSFPLGQLTAVTGVSGSGKSTLVNDIL
HAVLANTVNGARLVPGRHTRISGLDLVDKVVGVDQSPIGRTPRSNPATYTGVFDNIRKLF
AETTEAKVRGYGPGRFSFNVKGGRCEACAGDGTIKIEMNFLPDVYVPCEVCKGARYNRET
LEVHYKGRTIAEVLDMPIEEASGFFEAIPAIHRHLKTLVDVGLGYVRLGQPAPTLSGGEA
QRVKLASELQKRSTGRTVYVLDEPTTGLHFEDIRKLLIVLQGLVDKGNSVIVIEHNLDVI
KAADWIIDMGPEGGHKGGTVVAAGTPEEVAEIPESYTGQYLRHALHLKGDPTGDPAARDR
AAQSNGTKPAPTARKSTTAARSTAAKSTPAKAAPAKAAPAPAPAKATAARTTATKTTAAA
ATKAAAATKTAAAKKAAPRKTAAKKATTKS
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccgcttgatcatccgtggcgcacgggagcacaatctccgcgacgtcagtctt
gacctgccgcgcgacgcgatgatcgtgttcaccgggctctccggctcgggcaagtcgagc
cttgcgttcgacacgatcttcgccgagggccagcggcgttacgtggagtcgctgtcgtcc
tacgcgcggcagttcctcggccagatggacaagcccgacgtggacttcatcgagggcctg
tccccggcggtctccatcgaccagaagtcgacctcgcgcaacccgcgctcgacggtcggc
acgatcacggaggtctacgactacctccggctgctctacgcgcgcgtcggcgagccgcac
tgcccggtctgcggcgagctgatcaccaagcagacgccgcagcagatcgtcgaccgggtt
ctcgcgatggaggagggcacccgcttccaggtgctcgcgccggtcgtgcgggggcgcaag
ggcgagtacatcgacctgttcgccgagctgcagtccaagggctacgcccgggcccgcatc
gacggcgtcgtgcacccgctgaccgagccgccgaagctcaagaagcaggagaagcacacc
atcgaggtggtcgtcgaccggctcgcggtgaagaagtcggccaagcagcgcctcaccgac
tcggtggagaccgcgctcaagctggccgccggcatcgtgatcctcgagttcgtcgacgtg
cccgagggcgacgagcaccgcgagcggctgttctccgagcacctcgcctgccccaacgag
cacccgctgtcgatcgaggatctcgagccgcgctcgttctcgttcaacgcgccctatggc
gcctgccccgactgcaccggcatcggcaccaagaaggaggtcgacccggagctgatcatc
ccggaccccgagcgcacgctgcgcgacggcgccgttgcgccgtgggcgaccgggcacacg
ctcgactacttcctgcggctgctggaggcgctcggcgacgaggagggcttcaacctcgac
acgccgtggcaggggatctcctcgcggggccagaaggccatcctctacggctccgacgac
caggtccacgtccgctaccgcaacaagtacgggcgcgagcgctcctactacaccggcttc
gagggcgtggtgcagtggatcgagcggcggcacgccgacaccgagagcgactggtcccgg
gacaagtacgaggggtacatgcgcgacgtgccctgcggtacctgcggcggcacccggctc
aagcccgagatcctggccgtgacgatcgacgggcgcagcatcgccgaggtctgcaacctg
tccgtcggcgagtgcgcggacctgctggggcagatggagctcaccgaccggcagaagatg
atcgccgagcgggtgctcaaggagatcaacgcccggctgcgcttcctggtcgacgtcggc
ctcgactacctctcgctcgaccgggcgtccggcacgctgtccggcggcgaggcccagcgc
atccggctggccacccagatcggctccgggctggtcggcgtgctctacgtgctcgacgag
cccagcatcggcctgcaccagcgcgacaaccaccggctcatcgagaccctggtgcggctc
aagaccctcggcaacacgctcatcgtcgtcgagcacgacgaggacaccatccgcaccgcc
gactggatcgtcgacatcgggcccggcgccggcgagcacggcgggcgggtcgtgcacagc
gggccctacgaggggctcatcgcgagcgaggagtcggtgacgggggcgtatctcgccggt
cgccgcagcatcccgacgccggagatccgccggccccgcacccccggccgcgagctcgtg
gtggtcggcgcgcgcgagcacaacctgcacaacctcacggtgtcgttcccgctcgggcag
ctcaccgcggtcaccggggtctccggctccggcaagtcgacgctcgtcaacgacatcctg
cacgccgtgctggccaacaccgtcaacggcgcccggctcgtccccggccggcacacccgc
atctccgggctcgacctcgtcgacaaggtcgtcggcgtggaccagtcgccgatcggccgc
acgccgcgctccaacccggcgacgtacaccggcgtcttcgacaacatccgcaagctcttc
gccgagacgaccgaggcgaaggtgcgcggctacggccccggccgcttctcgttcaacgtc
aagggcggccgctgcgaggcgtgcgccggcgacggcacgatcaagatcgagatgaacttc
ctgcccgacgtctacgtcccgtgcgaggtctgcaagggggcgcggtacaaccgcgagacg
ctggaagtgcactacaagggccggacgatcgccgaggtcctggacatgccgatcgaggag
gcgtcgggcttcttcgaggccatcccggcgatccaccgccacctgaagacgctcgtcgac
gtcggcctcggctacgtgcgcctgggccagcccgccccgaccctctccggcggcgaggcc
cagcgcgtgaagctggcctcggagctgcagaagcgctcgacgggccgcaccgtgtacgtc
ctggacgagcccaccaccggcctgcacttcgaggacatccgcaagctgctcatcgtcctg
cagggccttgtcgacaagggcaactcggtgatcgtcatcgagcacaacctcgacgtcatc
aaggcggccgactggatcatcgacatgggcccggagggcggccacaagggcggcacggtg
gtcgcggccggcaccccggaggaggtggccgagatcccggagagctacaccggccagtac
ctccgccacgccctccacctgaagggcgaccccaccggcgacccggccgcccgcgaccgc
gccgcccagtccaacggcaccaagcccgccccgaccgcccgcaagtccacgacggccgca
cggtccaccgccgccaagtccacccccgcgaaggccgccccggccaaggcggccccggcc
ccggccccggccaaggccactgcggcccggacgacagcgacgaagaccactgccgcggcg
gcgaccaaggcggcggctgctacgaagacggcagcggcgaagaaggcggcaccgcgcaag
acggccgcgaagaaggccacgacgaagagctga
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