Dactylosporangium vinaceum: Dvina_10990
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Entry
Dvina_10990 CDS
T07478
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dvc
Dactylosporangium vinaceum
Pathway
dvc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dvc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dvina_10990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvc03019
]
Dvina_10990
03400 DNA repair and recombination proteins [BR:
dvc03400
]
Dvina_10990
Enzymes [BR:
dvc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dvina_10990
Messenger RNA biogenesis [BR:
dvc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Dvina_10990
DNA repair and recombination proteins [BR:
dvc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dvina_10990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF3553
PcrA_UvrD_tudor
AAA_19
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UAB98559
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All DBs
Position
2504822..2506453
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AA seq
543 aa
AA seq
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MSAEELRRVASESFGWERLRDEQLRAMEALMAGRDALAVLPTGAGKSAIYQVPAPLLPGP
TIVVSPLLALQQDQISSLTARNHEDLVAVRLSSAEGKTEREEALESLRKGDAEFVFLTPE
QFADPARVAQIKALKPSLVAVDEAHCVSAWGHDFRPDYLQLGQFIRELGRPPIVALTATA
SPPVREDIIDRLGLRDPEVVVMGLDRPNLYLESVHCADEEIRYRRLVSRIQESEMPGIVY
APTRRATEELAERLSQEGLKAVAYHGGMSAGDRERAHEAFLADEVPIMVATTAFGMGIDK
PNIRWVNHVSLPDSPDSYLQEIGRAGRDGQPAHVLLLHRTEDTGLRKFFSNVSVDKEEVA
SLAALLRSAKEPLTRGELEEQTGLGERKLGQLLGLLEEVGGARMLHGGKVKAPRWAPAPA
KAAELVEAQAERQQTVSRSRLDMMRNFAETQQCRGRTLLAYFGEHLEGTCEHCDNCTDGS
AAEGLAAADEAPFPIHAEVRHGEWGKGVVLSYAGEQMTVLFEQVGYKTLSVPVVKEHRLL
RKV
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcggaagaactgcggcgggtcgcgagcgagagtttcggatgggagcggctgcgc
gacgagcagctgcgggccatggaggccctcatggccggccgggacgcgctcgcggtgctg
ccgaccggggccggcaagtcggcgatctaccaggtgccggcgccgctgctgccggggccg
acgatcgtcgtctccccactgctcgcgctccagcaggaccagatctcgtcgctgaccgcg
cgcaaccacgaggacctggtcgcggtccggctctcctccgccgagggcaagacggagcgc
gaggaggcgctggagtcgctgcgcaagggcgacgccgagttcgtgttcctgacgcccgag
cagttcgccgacccggcccgggtggcccagatcaaggcgctcaagccgagcctggtcgcg
gtggacgaggcgcactgcgtgtcggcctgggggcacgacttccgcccggactacctccag
ctcggccagttcatccgggagctcggccgcccgcccatcgtcgcgcttaccgcgaccgcc
tcgccgccggtgcgcgaggacatcatcgaccgccttggcctgcgcgaccccgaagtcgtc
gtcatgggtctggaccgccccaatttgtacctcgagtcggtccactgcgccgacgaggag
atccgctaccggcgcctggtctcccggattcaggagtccgagatgcccggcatcgtctac
gccccgacccgccgggccaccgaggagctggccgagcgcctgtcccaggagggcctgaag
gccgtcgcgtaccacggcgggatgagcgcgggcgaccgggagcgggcgcacgaggcgttc
ctggccgacgaggtcccgatcatggtcgcgacgacggcgttcggcatgggcatcgacaag
cccaacatccgctgggtcaaccacgtctccctgcccgactccccggactcctacctgcag
gagatcggccgcgccggacgcgacgggcaaccggcgcacgtcctgctgctgcaccgtacc
gaggacacgggtctgcggaagttcttcagcaacgtctccgtcgacaaggaggaggtcgcc
tcgctcgcggcgctgctgcgctcggcgaaggagccactgacccgcggcgagctggaggag
cagaccgggctgggggagcgcaagctcgggcagctgctcggcctgctggaggaggtcggc
ggcgcccgcatgctccacggcggtaaggtcaaggccccgcgctgggcgccggccccggcg
aaggcggccgagctggtggaggcccaggccgagcgccagcagacggtcagccggtcgcgg
ctggacatgatgcgcaacttcgccgagacccagcagtgccgcgggcgcacgctgctcgcg
tacttcggggagcacctcgagggcacgtgcgagcactgcgacaactgcaccgacggcagc
gccgcggaagggctcgcggcggccgacgaggcgccgttcccgatccacgccgaggtccgg
cacggggagtggggcaagggcgtggtgctgtcctatgcgggcgagcagatgacggtgctg
ttcgagcaggtcgggtacaagaccctgtcggtccctgtcgtcaaggagcaccggctgctg
cggaaggtgtag
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