Dactylosporangium vinaceum: Dvina_28715
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Entry
Dvina_28715 CDS
T07478
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
dvc
Dactylosporangium vinaceum
Brite
KEGG Orthology (KO) [BR:
dvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvc03021
]
Dvina_28715
Transcription machinery [BR:
dvc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Dvina_28715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
STAS_2
Sigma70_r4_2
STAS
Sigma70_r3
HTH_23
HTH_3
HTH_Crp_2
MarR
Sigma70_ECF
HTH_31
MDMPI_N
MarR_2
HTH_24
HTH_Tnp_4
DUF7343
HTH_37
DUF134
Motif
Other DBs
NCBI-ProteinID:
UAB92351
LinkDB
All DBs
Position
6380098..6381222
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AA seq
374 aa
AA seq
DB search
MELSMTLSSRPRESLVELDGVLDYASVPYLRQVVYERFDSGCHDITVDAARARLIDAASI
KVLLYLQQRAEKAGGRLRVTGARGIALTALEIAGVAKELDAYADLDWPEADRDRTPVDSA
ALHIGHGHWPVGVTELIGQLYALAPDDPRRARRRDEIIAMCLPAARNLARRYAGSGEPVG
DLVQVASLGLVKAVDGFDPERGLEFGAYATPTVAGELKRYFRDRTSAVRVPRRLQELRLE
MGKAREELGSTATVADLAAHLGVGEAEVAEVITAGHMQHPMSIDAPAGPESDDATIADGV
GGDDPAFGLVDLRVSLPAVIRSLPEREQRIIALRFYGNLSQSEIAARLGLSQMHISRLLT
HALSFLRRRLSEDG
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggaactgtcgatgacgctgtcctcccggccccgggaatcgcttgtcgagctggacggc
gtgctcgactacgcctccgtgccatacctgcgccaggtcgtgtacgagcgcttcgacagc
ggctgccatgacatcaccgtggatgccgcgcgcgcccggctgatcgacgcggcctccatc
aaggtgctgctctacctgcaacaacgtgccgagaaggccggcggtcggctgcgcgtgacg
ggggcccggggcatcgcgctgaccgccctggagatcgccggcgtcgccaaggagctcgac
gcctacgccgacctggactggccggaggccgaccgcgaccgcacgcccgtcgactcggcc
gccctgcacatcgggcacgggcactggccggtcggcgtgaccgagctgatcgggcagctg
tacgccctggcccccgacgacccccgccgagcccgccggcgcgacgagatcatcgcgatg
tgtctgcccgcggcccgcaacctggcccggcgctacgccggctccggcgagcccgtcggc
gacctcgtccaggtggcgtcgctgggcctggtcaaggcggtcgacggcttcgaccccgag
cgcggcctcgagttcggcgcctacgcgacgccgacggtcgccggggagctgaagcggtac
ttccgcgaccggacgagcgccgtgcgcgtcccccgccgcctgcaggagctgcggctggag
atgggcaaggcgcgtgaggagctcggctcgacggccaccgtcgccgacctggccgcccac
ctcggcgtcggcgaggccgaggtcgccgaggtcatcacggccgggcacatgcagcacccg
atgtcgatcgacgcgcccgccggccccgagtccgacgacgccaccatcgcggacggcgtg
ggcggcgacgaccccgccttcggcctggtggacctgcgcgtctcgctgcccgcggtgatc
aggagcctgcccgagcgggagcagcggatcatcgcgctgcgcttctacggcaacctgagc
cagtccgagatcgcggcgcgtctcggactgtcccagatgcacatctcccggctgctcacc
cacgccctgagcttcctgcgccgccggctcagcgaggacggctag
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