Dactylosporangium vinaceum: Dvina_29015
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Entry
Dvina_29015 CDS
T07478
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
dvc
Dactylosporangium vinaceum
Brite
KEGG Orthology (KO) [BR:
dvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvc03021
]
Dvina_29015
Transcription machinery [BR:
dvc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Dvina_29015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
KORA
Sigma70_ECF
IF2_N
HTH_Crp_2
HTH_3
HTH_Tnp_4
HTH_23
DUF7343
HTH_10
MarR_2
HNF-1_N
GerE
MarR
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
UAB92402
LinkDB
All DBs
Position
6444242..6445045
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AA seq
267 aa
AA seq
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MTIQVNATRTAGSARAAQDAEARALLSLLADLPAGPDRDRVRGRVIELYLPLAQHLAGRF
RNRGEQLDDLLQVATVGLIKAVDGFDPDNGAVFVGYAIPTITGELKRHFRDRCWDVRVPR
RIQENRLRVMRVTGELTQRLGRSPTVADLAAELETSEEDVIEALDAGRAYRSLSLDAPAN
TNESDGPTDLSNLLGADDADMEQVETREALRPLLARLPEREQKIIAMRFFGNRTQSQIAA
ELGVSQMHISRLLTKALATLRTQLTRG
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgacgatccaagtcaacgccacccgcaccgccggctccgcccgcgccgcccaggacgcc
gaggcccgggcgctgctgagcctcctcgccgacctgcccgccggccccgaccgggaccgg
gtccgcggccgcgtcatcgagctgtacctgccgctggcccagcacctggccggccgcttc
cgcaaccgcggcgagcagctcgacgacctgctccaggtggcgaccgtcggcctgatcaag
gcggtcgacgggttcgacccggacaacggcgccgtcttcgtgggctacgccatccccacg
atcaccggcgagctcaagcgccacttccgcgaccgctgctgggacgtccgcgtgccccgc
cgcatccaggagaaccgcctgcgcgtcatgcgcgtcaccggcgagctcacccagcgcctg
ggccgctcgccgaccgtcgccgacctggccgccgagctggagacgtccgaggaggacgtg
atcgaggccctggacgccgggcgcgcctaccgcagcctgagcctcgacgccccggcgaac
accaacgagtccgacggcccgaccgacctgagcaacctcctgggcgccgacgacgccgac
atggagcaggtcgagacccgcgaggccctgcgcccgctcctggcccgcctcccggagcgc
gagcagaagatcatcgccatgcgcttcttcggcaaccgcacccagtcgcagatcgccgcc
gagctcggcgtgtcccagatgcacatctcgcgcctgctcaccaaggccctggccaccctg
cgcacgcagctcacccgcggctga
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