Dactylosporangium vinaceum: Dvina_32010
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Entry
Dvina_32010 CDS
T07478
Name
(GenBank) pectate lyase
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
dvc
Dactylosporangium vinaceum
Pathway
dvc00040
Pentose and glucuronate interconversions
dvc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dvc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Dvina_32010
Enzymes [BR:
dvc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Dvina_32010
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GFIT
Motif
Pfam:
Pectate_lyase
F5_F8_type_C
F5_F8_type_C_2
DUF7402
Motif
Other DBs
NCBI-ProteinID:
UAB92921
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Position
complement(7183380..7184597)
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AA seq
405 aa
AA seq
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MRRVALRWLGGGVAAVAVGAVTLAMQVPNAAAATNLSIGAGADGSSKASGSSYGNVIDGN
TSTYWSPNGSTGQINVKWGSATTVSSVVIRTASGGGSINAWRLLNYDSGAVLASGSGTPS
TINFSSTSLKKISLDITSASSAPRIAEFETYSSGGSNPTPTATGGGGNPTPTATGGGGGG
NPTTTWPSSAGNVSLSGTKSVSGTFDGGMKTYCCIGDGSQSESQDPMFELANGATIQNVI
LGSPAGDGIHCLGTCTIRNVWWNDIGEDGATFLQTNGGTSYVIGGGARSGSDKMFQHNGN
GTVSISGFYLKGTGKLYRACGNCTNSYTRNVKVDNVIVDDVDYLVGINSNWGDVATITRV
RVLNSSSIKICAKYKGVAKGSEPSYIGEGWNDANCKVNKSDITYG
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgagacgagtcgctctgcgatggctgggaggaggagtcgccgcggtcgccgtgggcgct
gtcacgctggcgatgcaggtgcccaacgcggcggctgccaccaacctcagcatcggcgcc
ggtgcggacggctccagcaaggccagcggcagcagctacggcaacgtgatcgacggcaac
accagcacgtactggtcgccgaacggcagcaccgggcagatcaacgtcaagtggggcagc
gcgacgacggtgtcctcggtcgtcatccgcacggcgtccggcggtggctccatcaacgcg
tggcggctgctcaactacgactcgggcgcggtactggccagcggcagcggcacgccgagc
accatcaacttctcctcgacctcgctgaagaagatctcgctcgacatcacgagcgcgtcg
agcgcgccccggatcgccgagttcgagacctactcgtccggtggctcgaacccgacgccg
accgcgaccggcggtggtggcaacccgacgccgaccgcgaccggcggtggtggcggcggc
aacccgaccacgacgtggccgtcgtccgcgggcaacgtgtcgctctccggcacgaagagc
gtctccgggacgttcgacggcgggatgaagacgtactgctgcatcggtgacggcagccag
tccgagagccaggacccgatgttcgagctggccaacggggccacgatccagaacgtgatc
ctcggctcgccggccggcgacggcatccactgcctgggcacctgcacgatccgcaacgtg
tggtggaacgacatcggcgaggacggcgcgacgttcctgcagaccaacggcgggacgtcg
tacgtgatcggcggcggtgcgcgctccggcagcgacaagatgttccagcacaacggcaac
ggcacggtcagcatcagcggcttctacctcaagggcacgggcaagctgtaccgggcctgc
ggcaactgcaccaactcgtacacccgcaacgtgaaggtcgacaacgtgatcgtcgatgac
gtggactacctcgtgggcatcaactccaactggggcgacgtcgcgaccatcacccgggtc
cgggtgctcaacagctccagcatcaagatctgcgccaagtacaagggcgtcgcgaagggc
agcgagccgtcgtacatcggcgagggctggaacgacgcgaactgcaaggtgaacaagagc
gacatcacctacgggtga
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