Dactylosporangium vinaceum: Dvina_42380
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Entry
Dvina_42380 CDS
T07478
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
dvc
Dactylosporangium vinaceum
Pathway
dvc00750
Vitamin B6 metabolism
dvc01100
Metabolic pathways
dvc01240
Biosynthesis of cofactors
Module
dvc_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
dvc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
Dvina_42380 (pdxS)
Enzymes [BR:
dvc01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
Dvina_42380 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
NanE
His_biosynth
NMO
IGPS
Glu_synthase
DHO_dh
Motif
Other DBs
NCBI-ProteinID:
UAB94696
LinkDB
All DBs
Position
complement(9491027..9491926)
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AA seq
299 aa
AA seq
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MSSPSSPVTGTARVKRGMAEMLKGGVIMDVVTPEQAKIAEDAGAVAVMALERVPADIRAQ
GGVSRMSDPDMIDGIIAAVSIPVMAKARIGHFVEAQVLQALGVDYIDESEVLTPADYANH
IDKWAYTVPFVCGATNLGEALRRINEGAAMIRSKGEAGTGDVSNATTHMRKIRGEIRRLT
SLPEDELFVAAKELQAPYELVKEVAETGKLPVVLFTAGGIATPADAAMMMQLGAEGVFVG
SGIFKSGNPAQRAAAIVKAVTFHDDPDVIAKVSRGLGEAMVGINVDEIPEPHRLAERGW
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctcacccagttcgccggtcaccggcacggcccgcgtcaagcgcggcatggccgag
atgctcaagggcggcgtcatcatggacgtcgtcacccccgagcaggccaagatcgcggag
gacgccggcgccgtcgcggtgatggcgctcgagcgggtccccgccgacatccgcgcccag
ggcggcgtgtcccggatgagcgaccccgacatgatcgacggcatcatcgccgccgtgtcg
atcccggtcatggccaaggcccgcatcgggcacttcgtcgaggcccaggtcctgcaggcg
ctcggcgtcgactacatcgacgagtccgaggtgctcaccccggccgactacgccaaccac
atcgacaagtgggcctacaccgtgccgttcgtgtgcggcgccaccaacctcggcgaggcg
ctgcggcgcatcaacgagggcgcggccatgatccgctcgaagggagaggccggcaccggc
gacgtctccaacgccaccacgcacatgcgcaagatccgcggcgagatccgccggttgacg
tcgctgcccgaggacgagctgttcgtcgcggccaaggagctgcaggcgccttacgagctg
gtcaaggaggtcgccgagaccggcaagctgcccgtcgtgctcttcaccgcgggcggcatc
gccaccccggccgacgccgcgatgatgatgcagctcggcgccgagggcgtgttcgtcggc
tccggcatcttcaagtccggcaacccggcccagcgggccgccgcgatcgtcaaggccgtc
accttccacgacgaccccgacgtgatcgccaaggtctcccgcggcctcggtgaggcgatg
gtcggcatcaacgtcgacgagatcccggagccgcaccgcctcgccgaacgcggctggtga
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