Dactylosporangium vinaceum: Dvina_42605
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Entry
Dvina_42605 CDS
T07478
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dvc
Dactylosporangium vinaceum
Pathway
dvc03030
DNA replication
dvc03410
Base excision repair
dvc03420
Nucleotide excision repair
dvc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dvina_42605 (polA)
03410 Base excision repair
Dvina_42605 (polA)
03420 Nucleotide excision repair
Dvina_42605 (polA)
03440 Homologous recombination
Dvina_42605 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dvc03032
]
Dvina_42605 (polA)
03400 DNA repair and recombination proteins [BR:
dvc03400
]
Dvina_42605 (polA)
Enzymes [BR:
dvc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dvina_42605 (polA)
DNA replication proteins [BR:
dvc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Dvina_42605 (polA)
DNA repair and recombination proteins [BR:
dvc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Dvina_42605 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dvina_42605 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_lambd_f
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UAB94736
LinkDB
All DBs
Position
complement(9541872..9544595)
Genome browser
AA seq
907 aa
AA seq
DB search
MSYPRTRVAGVTGSTDSRLLLLDGHSLAYRAFFALPAENFSTATGQVTNAVFGFTSMLIN
MLRDEQPTHIGVAFDVSRNTFRLERYAEYKANRSATRPEFVGQVPLIKEVLNALRIPFIE
KPGYEADDVIATLARRAAAAGIPTSIITGDRDSFQLVDDLITVLYLKRGVTEMDRMTPAK
VEEKYGIPPSQYRDKAALVGEDSDNLSGVPGVGDKTAAKWIVQFGGLDGIIARVDEIKGK
AGENVRAHLAEVMRNYDLNALVDDLELPVGPEDLRWKGWDREAVHQIFDSLEFRVLRDRL
YQYLEAVEPEAESGFDLNGEVLHGGVGAWLAEHAPAGTRTGVAVSGKFGRGTGALTGLAV
AAADGPAAWFDPAELDADDDAAVAAWLAAEDRPKVLHDVKPARLAFQARGWTPLAGIVID
TALEAYLARPDQRSYNLDDLALRYLKRELRVDAPDTGQLTLEGLGGNTGEAEENLMLRAR
ATLDLADAIGEELKRDGDSSDRLLAEVELPLVGVLAEMERAGIAADTEYLSELESQFAAG
VKSAAQAAYEVIGREFNLGSPKQLQEILFNELSLPKTKKIKTGYTTDADALQSLYAQTEH
PLLAHLLRHRDVAKLKTTVDGLLKSISDDGRIHTTYYQTVAATGRLSSTDPNLQNIPIRT
EEGRRIRRAFIVGAGYETLLTADYSQIEMRIMAHLSKDTALIEAFNSGFDFHAATASSVF
NVPIDEVVPDQRRKIKAMNYGLAYGLSSYGLGNQLGITPAEATVLMEEYFATFGGVRDYL
REIVAQARRDGYTETVLGRRRYLPDLNSDNRQRREMAERMALNAPIQGSAADIIKVAMLR
VDEALRASGLNSRMLLQVHDELLFEVSPGEREPLEALVRAEMGGAYPLDVPLGVSVGVGS
DWNAADH
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgtacccccggactagggttgcgggtgtgacgggttcgactgactccaggctgttg
ctcctcgacgggcactcgctcgcctatcgggcgttcttcgccctgcccgcggagaacttc
tccacggcgacgggccaggtgacaaacgccgtcttcggcttcacgtcgatgctgatcaac
atgctgcgcgacgagcagccgacacacatcggggtggcgttcgacgtctcccgcaacacg
ttccgcctcgagcgttacgcggagtacaaggccaaccgctccgcgacccggcccgagttc
gtcggccaggtgccgctcatcaaggaagtcctcaacgcgctgcggatcccgttcatcgag
aagcccggctacgaggccgacgacgtgatcgccaccctcgcccggcgggccgccgcggcc
ggcatcccgacctcgatcatcaccggcgaccgcgactccttccagctggtcgacgacctc
atcacggtgctctacctgaagcgcggcgtcaccgagatggaccgcatgacgccggccaag
gtcgaggagaagtacgggattccgccgtcgcagtaccgtgacaaggccgccctggtcggc
gaggacagcgacaacctgtccggcgtcccgggcgtcggcgacaagaccgcggccaagtgg
atcgtgcagttcggcggcctggacgggatcatcgcccgggtcgacgagatcaagggcaag
gccggcgagaacgtgcgggcccacctggccgaggtcatgcgcaactacgacctcaacgcc
cttgtcgacgacctcgagctgcccgtcgggcccgaggacctgcgctggaagggctgggac
cgcgaggcggtgcaccagatcttcgactcgctggagttccgggtgctgcgcgaccggctg
taccagtacctggaggccgtcgagcccgaggccgagtccggcttcgacctcaacggcgag
gtgctgcacggcggcgtcggcgcctggctcgccgagcacgccccggccggcacccgcacc
ggcgtcgccgtctccggcaagttcggccgcggcaccggcgcactcaccgggctcgccgtg
gccgccgccgacggccccgcggcctggttcgacccggccgagctcgacgcggacgacgac
gccgcggtcgccgcctggctggccgccgaggaccggcccaaggtcctgcacgacgtgaag
ccggcccggctggcgttccaggcccggggctggacgccgctcgccgggatcgtgatcgac
acggccctggaggcgtatctcgcccgccccgaccagcgctcctacaacctcgacgacctg
gccctgcggtacctgaagcgggaactgcgcgtggacgctcccgacaccggccagctgacc
ctggaaggcctcggcggcaacaccggcgaggccgaggaaaacctcatgctccgggcccgg
gccacgctcgacctggccgacgccatcggcgaggagctcaagcgcgacggcgactcgtcg
gaccgcctgctggccgaggtggagctgcccctcgtcggcgtgctggccgagatggagcgg
gccgggatcgccgccgacaccgaatacctcagcgagctggagtcccagttcgcggccggc
gtgaagagcgccgcccaggccgcctacgaggtgatcggccgcgagttcaacctcggctcg
cccaagcagctccaggagatcctcttcaacgagctgagcctcccgaagaccaagaagatc
aagaccggctacaccaccgacgccgacgccctccagagcctctacgcgcagaccgagcac
ccgctcctggcgcacctcctgcgccaccgcgacgtcgccaagctcaagaccacagtcgac
ggcctgctcaagtccatcagcgacgacgggcgcatccacaccacctactaccagacggtc
gccgccaccggccgcctctccagcaccgaccccaacctgcagaacatcccgatccgcacc
gaagagggccgccgcatccgccgcgccttcatcgtcggcgccggctacgagaccctgctg
accgcggactacagccagatcgaaatgcgcatcatggcccacctgtccaaggacaccgcc
ctgatcgaggcgttcaactccggcttcgacttccacgccgccaccgcgtcctcggtcttc
aacgtccccatcgacgaggtcgtccccgaccagcgccgcaagatcaaggccatgaactac
ggcctcgcctacggcctgtcctcctacggcctgggcaaccagctcggcatcacccccgcc
gaggccacggtcctcatggaggagtacttcgccacgttcggcggcgttcgcgactacctc
cgcgagatcgtcgcccaggcccgccgcgacggctacaccgagaccgtcctcggccgccgc
cgctacctcccggacctcaacagcgacaaccgccaacgccgcgagatggccgagcgcatg
gccctcaacgcccccatccagggctcggccgccgacatcatcaaggtggcgatgctgcgg
gtggacgaagccctgcgcgcgtcgggcctcaactcacggatgctcctgcaggtccacgac
gagctgctgttcgaggtgtcgccgggggagcgggagccgctggaggcactggtgcgggcg
gagatgggcggggcttatccgctggacgtaccgctcggcgtctcggtgggggtcggctcc
gactggaacgccgcggaccactga
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