Dactylosporangium vinaceum: Dvina_43690
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Entry
Dvina_43690 CDS
T07478
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dvc
Dactylosporangium vinaceum
Pathway
dvc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dvc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dvina_43690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvc03019
]
Dvina_43690
03400 DNA repair and recombination proteins [BR:
dvc03400
]
Dvina_43690
Enzymes [BR:
dvc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dvina_43690
Messenger RNA biogenesis [BR:
dvc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Dvina_43690
DNA repair and recombination proteins [BR:
dvc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dvina_43690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF3553
PcrA_UvrD_tudor
DprA_WH
TrmB
Motif
Other DBs
NCBI-ProteinID:
UAB94911
LinkDB
All DBs
Position
9760765..9762477
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AA seq
570 aa
AA seq
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MNLVPAPTRLRRAARRDFGWETLRPGQLPPMRALLKQRDVLVVLPTGGGKSAIYQVPATL
INGPAIVISPLLALQQDQIAGLNRRRAGQAVRISSAETPAQQRKALEALQAGTARFLFIT
PEQLGNPERLAEVRALRPGLVAVDEAHCVSAWGYDFRPDYLQLGHLIRELGRPPIVALTA
TASPPVRADISAALGLRDPFVLVAGLDRANLELGAVHCTSEEQRWQRLFAQIQQEQNPGI
VYSPTRAIAEQYAQRLVEKGIPAVAFHAGLAAGERSRRYEDFMADRTPVMVATSAFGMGV
DKPNIRWVHHVALPDSPDSYLQEIGRAGRDGSPARTILFFRPEDVALQRFFATGAPDAKE
LTQLAAALREGPTTRTGLATRSGLAARRITSLLSLLEQVGAVEVGAGNKLTAPRYAPAPA
EAARLALAQFERHQTLRRSRIDMMRQYAESANCRGRSLLAYFGEQAEQPCGHCDNCANGS
VVVDPVVPRLKWYHRILRRKNTPLVPAPEIRKTEDHDRPFPVSSEVRHTAWGTGTVMAYE
QDRVVVLFEQVGYKTLSVPIVKKSKLLEPV
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgtgcccgcgccgacccgcctgcgccgcgccgcccgccgtgacttcggctgg
gaaacgctccgcccgggacagctcccgccgatgcgcgccctgctcaagcagcgtgacgtc
ctggtggtgttacccaccggcggcggcaaatccgcgatctaccaggtgccggcgaccctg
atcaacgggccggccatagtcatctcaccactcctggcgctccagcaggaccagatcgcc
gggctcaaccgccgccgggccggccaggccgtgcggatcagctccgccgagacgcccgcg
cagcagcgcaaggccctcgaggcgctgcaggcggggaccgcgcggttcctgttcatcacg
ccggagcagctgggcaacccggagcgcctcgccgaggtccgcgcgctgcggcccggcctg
gtcgccgtcgacgaggcgcactgcgtgtccgcctgggggtacgacttccggccggattat
ctgcagttgggccatctgatccgggagctcggccggccgccgatcgtcgcgctgacggcc
acggcgtcgccgcccgtgcgggccgacatcagcgccgcgctcggcctgcgcgacccgttc
gtcctggtcgccgggctggaccgggccaatctggagctcggtgccgtgcactgcacgagc
gaggagcagcgctggcagcgcctcttcgcgcagatacagcaggagcagaaccccggcatc
gtgtactcgcccacccgcgcgatcgccgagcagtacgcgcagcgcctggtcgagaagggc
atccccgccgtcgccttccacgcgggactggccgcgggcgagcgcagccggcgctacgag
gacttcatggccgatcggaccccggtcatggtggccacgagcgcgttcggcatgggcgtc
gacaagcccaacatccgctgggtccaccacgtcgcgctgcccgactcccccgacagctac
ctgcaggagatcgggcgcgccgggcgcgacgggtccccggcccgcaccatcctgttcttc
cggcccgaggacgtggccctgcagcggttcttcgccaccggcgcgcccgacgccaaggag
ctcacccagctcgccgcggcgctgcgcgaggggccgacgacccgcaccggactggccacc
cgcagcgggctggcggcccggcggatcacctcgctgctgagcctcctggagcaggtcggc
gcggtcgaggtcggggccggcaacaagctgaccgcgccccgctacgccccggcccccgcc
gaggccgcccggctcgcgctggcccagttcgagcgccaccagacgctgcgccgatcgcgg
atcgacatgatgcggcagtacgccgagagcgcgaactgtcgcggccggtccctcctggcc
tacttcggtgagcaggccgagcagccgtgcggacactgtgacaactgcgccaacggcagt
gtcgtggtcgatccggtggtgccgcgcctcaagtggtaccaccggatcttgcgcaggaag
aacacaccgctcgtgcccgcaccggagatccgcaagacggaggaccacgaccggcccttc
ccggtgtcgagcgaggtgcggcacaccgcctggggcaccggcacggtgatggcctacgag
caggaccgcgtcgtcgtactgttcgagcaggtcgggtacaagacgctgagcgtgccgatc
gtcaagaagtcgaaactcctcgaaccggtgtag
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