Dactylosporangium vinaceum: Dvina_44045
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Entry
Dvina_44045 CDS
T07478
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dvc
Dactylosporangium vinaceum
Pathway
dvc03030
DNA replication
dvc03430
Mismatch repair
dvc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dvina_44045 (dnaE)
03430 Mismatch repair
Dvina_44045 (dnaE)
03440 Homologous recombination
Dvina_44045 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dvc03032
]
Dvina_44045 (dnaE)
03400 DNA repair and recombination proteins [BR:
dvc03400
]
Dvina_44045 (dnaE)
Enzymes [BR:
dvc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dvina_44045 (dnaE)
DNA replication proteins [BR:
dvc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Dvina_44045 (dnaE)
DNA repair and recombination proteins [BR:
dvc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Dvina_44045 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UAB94975
LinkDB
All DBs
Position
complement(9830247..9833693)
Genome browser
AA seq
1148 aa
AA seq
DB search
MTPCGGLPGREGSGPGKLDFLSYPPSSVAAVGFVHLHVHTEYSMLDGAARLGPLFAEAAR
LGQPALAMTDHGNMFGAHDFYHQAIRAGIKPIIGVEAYLTPGTHRGDRTRVRWADGGEND
VSGGGAYTHLTLLAADATGLRNLFRLTSRASTEGYFYKPRADRELLAEYAPGLIATTGCP
SGEVQTWLRIGDFERACRAAGELLDIFGPGNLYLELMDHGLQIETRVRADLLRLGRRLGL
APIATNDLHYTFAGDADAHEALLAVQSATTLADPKRFKFDARDFYLKSAAEMRRIWDAEV
PGACDNTLAVAERIGDYADVFAHRSLMPTFPVPPGTTEDAVLRAEVERGLARRFPHGVSE
AHANQAAYELSVILGADLAGYFLVVADLVAHAHAQGIRVGPGRGSAAGSLVAYALGITEL
DPLAHGLLFERFLNPERPSMPDIDMDFDERRRGEMIRYATEQYGEDRVSQIITYGTIKAK
AAIKDAARVLGFPFSLGERISKAVPPPVLGRDMPLSGVFDPAHPRFKEGGELRRLYESEP
EVRTVVDTARGLEGLKRQWGVHAAGVILSREPLIDVLPIQKREQDGAIITQWDMGACEDM
GLLKMDFLGLRNLTIIDDALDAIRDNRRREVVIEDAPLDDAPTYALLSRGDTLGVFQFEA
TPVRHLLRSMAPDSFADVSAVGALYRPGPIAANAHNEYADRKNGRRPVTPIHPELAEPLA
DILGDTYGLIVYQEQVMAIAQRVAGYTLGAADRLRRAMGKKKKEILDQEFTDFAPAMRER
GYSEGAIRTLWDILVPFSDYAFNKAHSVAYGLVAYWTAYLKANFPAEYMAALLTSIGGDK
DRSAVYLAECRHMGIHVLPPDVNASKGRFAADGTDIRFGLGAVRNVGAAAVEAIVRARRE
KGRFADFYDFLAKVDQVVCNRKTIESLIKAGAFDSLGHSRRGLLSVHADALDAVSIVKRN
EAVGQFDLFGAPLMTAPPVPTMEWDKPERLAFEREMLGLYVSDHPLRGLEHVLRAAADRP
IAALAEEGTVPDGAVVRLAGILSGVQRKVTRQGRPWAQAVLEDLDGTIEVMFFPDTYEQV
DQWVAEDAVVALKGRVDRREEAPRIMVMDLSLPDLTAPAPPSPQVTPAAAADDDALAATG
RAPGRMGS
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgtgcgggggactgcccgggcgggagggaagcggccccggcaaacttgatttt
ctgtcgtaccccccgagtagcgtcgctgccgtgggcttcgttcatctgcacgttcatacc
gagtattcgatgctcgacggggccgcgcgcctcggcccgctgtttgcggaggctgcccgg
ctcggccagcccgcgctggccatgaccgaccacggcaacatgttcggcgcccacgacttc
taccaccaggcgatcagggccggaatcaagccgatcatcggcgtcgaggcatacctgacg
ccgggcacgcaccgcggcgaccgcacccgggtccgctgggccgacggcggcgagaacgac
gtctccggcggcggcgcctacacccacctcacgctgctggcggccgacgccaccggcctg
cgcaacctgttccgcctcacctcacgggccagcacggagggatacttctacaagccgcgc
gccgaccgcgaactgctcgccgaatacgcgcccgggctcatcgccaccaccggctgcccg
tccggcgaggtccagacctggctgcgcatcggcgacttcgagcgggcctgccgggccgcg
ggcgagctgctcgacatcttcggccccggcaacctctacctggagctgatggaccacggc
ctgcagatcgagacccgggtccgggccgacctgctgcgcctcgggcgccggctcgggctc
gccccgatcgcgaccaacgacctgcactacaccttcgccggtgacgccgacgcccacgag
gcgctgctcgccgtgcagtccgcgaccaccctggccgacccgaagcggttcaagttcgac
gcccgcgacttctacctcaagtcggccgcggagatgcggcggatctgggacgccgaggtc
cccggcgcctgcgacaacaccctggccgtggccgagcggatcggcgactacgcggacgtc
ttcgcccaccgcagcctgatgcccaccttcccggtgccgcccggcaccaccgaggacgcc
gtcctgcgggccgaggtcgagcgcggcctggcccggcgcttcccgcacggcgtctccgag
gcccacgccaaccaggccgcctacgagctgtcggtgatcctcggggccgacctcgccggc
tacttcctggtcgtcgccgacctcgtcgcccacgcccacgcgcagggcatccgggtcggc
ccgggccgcgggtcggcggccggctcccttgtcgcctacgcgctgggcatcaccgagctc
gacccgctcgcgcacgggctgctcttcgagcggttcctcaaccccgagcggccgagcatg
cccgacatcgacatggacttcgacgagcgccggcggggcgagatgatccgctacgccacc
gagcaatacggcgaggaccgcgtctcccagatcatcacctacggcaccatcaaggccaag
gcggcgatcaaggacgccgcccgcgtgctgggcttcccgttctccctcggtgagcggatc
agcaaggcggtgccgccgccggtgctcggccgtgacatgcccctgtccggcgtgttcgac
ccggcgcacccccggttcaaggagggcggtgagctgcgccggctctacgagtccgagccc
gaggtgcgcaccgtcgtcgacaccgcccgcggcctggaggggctcaagcggcagtggggc
gtccacgcggccggggtgatcctgtcgcgggagccgctgatcgacgtcctgccgatccag
aagcgggagcaggacggcgcgatcatcacccagtgggacatgggcgcgtgcgaggacatg
ggcctgctcaagatggacttcctcggcctgcgcaacctcacgatcatcgacgacgccctc
gacgcgatccgcgacaaccgccgccgcgaggtcgtcatcgaggacgcgccgctcgacgac
gccccgacctatgcgctgctgtcccggggcgacacgctcggcgtcttccagttcgaggcc
acgccggtccggcacctgctgcgctcgatggccccggacagcttcgccgacgtgtcggcg
gtcggtgcgctctaccggcccgggcccatcgcggcgaacgcccacaacgaatacgccgac
cgcaagaacggccgccgcccggtcaccccgatccaccccgagctggccgagcccctggcc
gacatcctcggcgacacctacggcctgatcgtctaccaggagcaggtcatggcgatcgcc
cagcgggtcgccggctacacgctcggcgccgccgaccggctgcggcgggccatgggcaag
aagaagaaggagatcctcgaccaggagttcaccgacttcgccccggccatgcgcgagcgc
ggctactcggagggcgcgatccgcaccctgtgggacatcctcgtgccgttctccgactac
gcgttcaacaaggcccacagcgtcgcctacgggctcgtcgcctactggacggcctacctc
aaggccaacttcccggccgaatacatggccgccctgctcacctccatcggcggcgacaag
gaccgctccgccgtctacctcgccgagtgccggcacatgggcatccacgtgctgccgccc
gacgtcaacgcctccaagggccgcttcgccgccgacggcaccgacatccgcttcggcctc
ggcgccgtgcgcaacgtcggcgccgccgcggtggaggccatcgtccgggcccgccgcgag
aagggccgcttcgccgacttctacgacttcctggccaaggtcgaccaggtcgtgtgcaac
cgcaagaccatcgagtccctgatcaaggcgggcgcgttcgactccctcggccactcccgc
cggggcctgctcagcgtccacgccgacgcgctcgacgcggtctcgatcgtcaagcgcaac
gaggctgtcggccagttcgacctgttcggcgccccgctcatgaccgccccgcccgtcccc
accatggagtgggacaagcccgaacgcctcgccttcgagcgcgagatgctcggcctctac
gtctccgaccacccgctgcgcggcctcgagcacgtcctgcgggccgccgccgaccgcccc
atcgcggcgctggccgaggagggcacggtccctgacggcgccgtggtccgcctggccggc
atcctctccggcgtccagcgcaaggtcacccgtcaagggcgcccgtgggcccaggcggtg
ctcgaggacctcgacggcaccatcgaggtcatgttcttcccggacacctacgagcaggtc
gaccagtgggtggccgaggacgcggtggtcgccctcaagggccgggtggaccgccgcgag
gaggctccccgcatcatggtcatggatctctccctgcccgatctgacagctcccgcccca
ccgtccccgcaggtcacaccggcggccgcggccgacgacgacgcgcttgccgcaacgggg
cgcgcgcctggcaggatgggatcgtga
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