Dactylosporangium vinaceum: Dvina_45620
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Entry
Dvina_45620 CDS
T07478
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
dvc
Dactylosporangium vinaceum
Brite
KEGG Orthology (KO) [BR:
dvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvc03021
]
Dvina_45620
Transcription machinery [BR:
dvc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Dvina_45620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
HTH_24
HTH_3
Sigma70_ECF
MarR_2
HTH_Tnp_ISL3
NirdL-like_HTH
HTH_31
MarR
HTH_Tnp_4
HTH_19
DUF7343
HTH_37
IF2_N
DksA-like_N
HTH_ParB
KORA
Phage_antitermQ
DUF1492
Motif
Other DBs
NCBI-ProteinID:
UAB95245
LinkDB
All DBs
Position
complement(10170216..10171178)
Genome browser
AA seq
320 aa
AA seq
DB search
MASADRQISRDPGTEGPCRALETRAPPAEFSAVSPRARACTAVWQGDPLMTAPTIRRTAP
IGRAPGKEAETAAASLLTLLADLPAESPDRPRIRARLIELYFPLAEYLARRFRNRGEPLD
DLTQVAGVGLIKSVDGYDPSRGAAFTSYAIPMIVGELKRHFRDKGWDVRVPRRLQELRLE
LGKVSGDLAQELGRSPTVADLATRVGVSEEEVIEGLESGHAYRALSINAPLGGIAEDTGA
ELADLLGGADRELEAVDDRESLRPLIARLPEREQRIIAMRFFGNLTQTQIAERLGISQMH
VSRLLAHALTFLRGELAEPF
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggcggatcgtcaaatcagccgcgatccaggcaccgaaggcccgtgccgggcg
ctcgagaccagggcgccaccggccgaattctcagccgtgtcgccgcgcgcccgcgcctgc
acggccgtctggcagggggaccccctcatgactgctcccaccattcgccgcaccgctccc
atcggccgcgccccgggcaaggaagccgaaacggccgccgcatcgctgctcacgctcctg
gccgaccttccggcggaaagccccgaccggccccgcatccgggcccggctcatcgagctg
tacttcccgctggccgagtacctggcccgccgcttccgcaaccgcggcgagcccctcgac
gacctgacccaggtcgccggcgtcggcctcatcaagtccgtggacggctacgacccgtcc
cgcggggccgccttcaccagctacgcgatcccgatgatcgtcggggagctcaagcggcac
ttccgcgacaagggctgggacgtccgcgtgccccgccggctgcaggagctgcgcctcgag
ctcggcaaggtctccggcgacctggctcaggagctgggccgctcgccgaccgtcgccgac
ctcgcgacccgcgtcggggtcagcgaggaggaggtcatcgagggcctcgagtcgggccac
gcgtatcgcgcgctgtccatcaacgcccccctcggcggcatcgccgaggacaccggcgcc
gagctcgccgacctcctcggcggcgcggaccgcgagctggaggcggtcgacgaccgggag
tcgctgcgcccgctcatcgcccgcctgccggagcgcgagcagcgcatcatcgcgatgcgc
ttcttcggcaacctcacgcagacccagatcgccgagcgcctcggcatctcccagatgcac
gtctcccgcctcctggcccacgcactcaccttcctgcgcggtgagctcgccgagccgttc
tga
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integrated database retrieval system
