Dactylosporangium vinaceum: Dvina_49865
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Entry
Dvina_49865 CDS
T07478
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
dvc
Dactylosporangium vinaceum
Pathway
dvc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dvc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Dvina_49865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvc03021
]
Dvina_49865
03400 DNA repair and recombination proteins [BR:
dvc03400
]
Dvina_49865
Enzymes [BR:
dvc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Dvina_49865
Transcription machinery [BR:
dvc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Dvina_49865
DNA repair and recombination proteins [BR:
dvc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Dvina_49865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
UAB95988
LinkDB
All DBs
Position
complement(11094918..11098343)
Genome browser
AA seq
1141 aa
AA seq
DB search
MAASRPAKTSSSAYAPRRVSFGRITEHLEVPNLLAIQTDSFDWLVGNEAWQSRSSGDQHA
RSGLAEILEEISPIEDFSGTMSLSFSAPRFDEVKAPIEECKEKDLTYCAPLFVTAEFTNH
TTGEIKSQTVFMGDFPMMTPKGTFIINGTERVVVSQLVRSPGVYFDKQPDKTSDRDLTSV
KVIPSRGAWLEFDIDKRDTVGVRIDRKRRQAVSVLLKAIGWSAERIREKFGWSELMMTTL
EKDHIAGQDEALLDIYRKLRPGEPPTRENAQNLLDNLFFNPKRYDVAKVGRYKFNKKLEL
DLPINQGVLTEEDIVATVEYLCRLHTGEEGYEADDIDHFGNRRLRTVGELIQNQVRVGLS
RMERVVRERMTTQDVEAITPQTLINIRPVVAAIKEFFGTSQLSQFMDQTNPLAGLTHRRR
LSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNIGLIGALSTFARVNPFGFVET
PYRKVVDGKVTDQIDYLTADEEDRYVKAQANAPLKSDGNFAEDRILVRRKGGEVDNVPAD
QVDYMDVSPRQMTSVATAMIPFLEHDDANRALMGANMQRQAVPLVKAESPLVGTGMEYRA
AVDAGDVVVAEVGGVVEDMCADYVTVHQDDGHRRTYLLHKFRRSNSGSCVNQKPVIFEGQ
RVEAGQVIADGPCTDEGEMALGRNLLVAFMPWEGHNYEDAIILSQKLVQNDVLTSIHIEE
HEVDARDTKLGPEEITRDIPNVSEEMLADLDERGIIRIGAEVVTGDILVGKVTPKGETEL
TPEERLLRAIFGEKAREVRDTSLKVPHGETGTVIGVRTFSREDGDELSPGVNELVRVYVA
QKRKIQDGDKLAGRHGNKGVISKILPVEDMPFLEDGTPVDIVLNPLGVPSRMNIGQVLET
HLGWVAKTGWKIDGDEHEWQRALKSINAGESEPDTNVATPVFDGAKEEEIAGLLSSTLPN
RDGKQLIGASGKARLFDGRSGEPLPDPIAVGYIYILKLNHLVDDKIHARSTGPYSMITQQ
PLGGKAQFGGQRFGEMECWAMQAYGAAYALQELLTIKSDDVLGRVKVYEAIVKGENIPEP
GIPESFKVLLKELQSLCLNVEVLSSDGVALEMRETDDEVFRAAEELGIDLSRREPSSVEE
V
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
ttggcagcttcccgccctgcgaagaccagttcgagcgcttacgctccccgccgggtctcc
ttcggcaggatcaccgaacaccttgaggttcccaacctcctcgccatccaaaccgactcg
ttcgactggttggttggcaacgaggcttggcagagccgctcgtccggtgatcagcacgcc
cgttccgggctcgcggagatcctcgaagagatcagtcctattgaggacttctccggcacg
atgtcgctgtcgttctccgcgccccgcttcgatgaggtcaaggccccgatcgaggagtgc
aaggagaaggacctcacctactgcgccccgctgttcgtgaccgcggagttcaccaaccac
accaccggcgagatcaagagccagacggtgttcatgggtgacttcccgatgatgacgccc
aagggcacgttcatcatcaatggcaccgagcgcgtcgtggtgagccagctcgtccgctcg
ccgggcgtgtacttcgacaagcagccggacaagacctccgaccgcgacctcaccagcgtc
aaggtcatcccgagccggggtgcctggctcgagttcgacatcgacaagcgcgacaccgtc
ggtgtccgcatcgaccgcaagcgccggcaggcggtctccgtcctgctcaaggccatcggc
tggtccgccgagcggattcgtgagaagttcggctggtccgagctcatgatgaccacgctc
gagaaggaccacatcgccggccaggacgaggcgctgcttgacatctaccgcaagctgcgg
cctggtgagccgccgacgcgggagaacgcgcagaacctcctcgacaacctgttcttcaac
ccgaagcggtacgacgtcgccaaggttggtcgatacaagttcaacaagaagctcgaactg
gatctgccgatcaaccagggcgtcctgaccgaagaggacattgtcgccacggtcgagtac
ctctgccgcctgcacaccggcgaagagggctacgaggccgacgacatcgaccacttcggc
aaccggcggctgcgcacggtcggcgagctcatccagaaccaggtccgcgtgggcctgtcc
cggatggagcgcgtcgtccgcgagcgcatgactacccaggacgtcgaggcgatcacgccg
cagaccttgatcaacatccgtcccgtcgtggcggcgatcaaggagttcttcggcacctcg
cagctctcccagttcatggaccagaccaacccgctggcgggcctgacccaccggcgccgg
ctgagcgcgctcggcccgggtggtctctcccgtgagcgggccggcttcgaggtccgcgac
gtgcacccgtcccactacggccgcatgtgcccgatcgagacccctgagggtcccaacatc
ggtctcatcggcgcgctctcgacgttcgcgcgggtcaacccgttcggcttcgtcgagacg
ccataccgcaaggtcgtcgacggcaaggtgaccgaccagatcgactacctgaccgcggac
gaggaggaccggtacgtcaaggcgcaggccaacgctccgctgaagagcgacggcaacttc
gccgaggaccggatcctggttcgccggaagggcggcgaggtcgacaacgtccccgccgac
caggtcgactacatggacgtgtcgccgcggcagatgacctcggtcgccaccgcgatgatc
ccgttcctcgagcacgacgacgccaaccgggcactgatgggcgcgaacatgcagcgccag
gccgtgccgctggtcaaggcggagtcgccgctcgtcggcaccggcatggagtaccgtgcc
gccgtcgacgccggcgacgtggtcgtggccgaggtcggtggggtcgtcgaggacatgtgc
gccgactacgtcaccgtccaccaggacgacggccaccgccgcacctacctgctgcacaag
ttccgccgctccaactccggctcctgcgtcaaccagaagccggtgatcttcgaggggcag
cgggtcgaggccgggcaggtcatcgccgacggtccgtgcaccgacgagggcgagatggcg
ctcgggcgcaacctgctcgtggcgttcatgccctgggagggccacaactacgaagacgcg
atcatcttgtcccagaagctggtgcagaacgacgtcctcacctcgatccacatcgaggag
cacgaggtcgacgcgcgcgacaccaagctggggccggaggagatcacccgcgacatcccg
aacgtcagcgaggaaatgctcgccgacctcgacgagcgggggatcatccggatcggcgcc
gaggtagtcaccggcgacatcctcgtcggcaaggtcacgcccaagggtgagaccgagctg
accccggaggagcggctgctgcgcgcgatcttcggtgagaaggcccgcgaggtccgcgac
accagcctcaaggtgccgcacggcgagaccggcacggtcatcggtgtgcgcacgttcagc
cgcgaggacggcgacgagctgtccccgggcgtgaacgagctggtccgcgtctacgtggcc
cagaagcggaagatccaggacggcgacaagctcgccggccgccacggcaacaagggtgtc
atctccaagatcctgcccgtcgaggacatgccgttcctcgaggacgggaccccggtcgac
atcgtcctcaacccgctcggtgtgccgagccgtatgaacatcgggcaggtcctggaaacc
cacctcgggtgggtggccaagaccggctggaagatcgacggcgacgagcacgagtggcag
cgcgccctgaagtccatcaacgcgggggagtccgagccggacaccaacgtggcgaccccg
gtcttcgacggcgccaaggaggaggagattgccggcctgctgagcagcacgctgcccaac
cgggacggcaagcagctcatcggggccagcggcaaggcgcggctgttcgacggccgctcc
ggcgagccgctcccggacccgatcgcggtcggctacatctacatcctgaagctcaaccac
ctggtcgacgacaagatccacgctcgctccaccggcccctactccatgatcacgcagcag
ccgctgggtggtaaggcgcagttcggtggccagcgcttcggtgagatggagtgctgggcg
atgcaggcctatggtgcggcttacgcgctgcaggagctgctgacgatcaagtccgacgac
gtcctcggacgcgtcaaggtctacgaggcgatcgtcaagggcgagaacatcccggagccg
ggcattccggagtccttcaaggtgctcctcaaggagctgcagtcgctgtgcctgaacgtc
gaggtgctctccagcgatggtgtggccctcgagatgcgcgagacggacgacgaggtgttc
cgggccgccgaggagttgggcatcgacctctcgcggcgcgagccgagcagcgtcgaggaa
gtttga
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