Dactylosporangium vinaceum: Dvina_50070
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Entry
Dvina_50070 CDS
T07478
Name
(GenBank) DEAD/DEAH box helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dvc
Dactylosporangium vinaceum
Pathway
dvc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dvc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dvina_50070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvc03019
]
Dvina_50070
03400 DNA repair and recombination proteins [BR:
dvc03400
]
Dvina_50070
Enzymes [BR:
dvc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dvina_50070
Messenger RNA biogenesis [BR:
dvc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Dvina_50070
DNA repair and recombination proteins [BR:
dvc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dvina_50070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Pribosyltran
RecQ_Zn_bind
Dimerisation
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
UAB96021
LinkDB
All DBs
Position
complement(11133818..11135908)
Genome browser
AA seq
696 aa
AA seq
DB search
MRQEATQVLKKLAGPTAELREDQWTAIEALVAGHRRVLCVQRTGWGKSAVYFVATALLRA
RGAGPTVIVSPLLALMRNQTDAAARAGITARTINSSNLEEWDAITAEIADGAVDVLLVSP
ERLNNPAFRDDVLPKLAATTGLLVVDEAHCVSDWGHDFRPDYRRLRTLLLDLAPGTPVLA
TTATANSRVTADVAEQLGDALVLRGSLDRESLRMGALTLPSPSHRLAWLAEHLRDLPGSG
IIYTLTVAGAEETAAFLRGQGYDVASYTGKTEGADRLGAEADLLGNRIKALVATSALGMG
FDKPDLGFVVHLGAPSSPIAYYQQVGRAGRAVEKADVLLLPGREDADIWRYFASLAFPPE
HQVREVLDALAAAGRPLSTQTLEPRVELRHSRLELLLKVLDVDGAVHRVSGGWESTGVPW
QHDTERYARIAQAREAEQEAMREYTALTSCRLEFLRRQLDDPDAAPCGRCDNCAGVWFPT
EVSPAALDAARGHLGRAGVEIAPRRKWPTGMSAVGVPVNGNIPKSEQSLPGRAIGRLSDL
GWGDRLRAALNGPDAPISDELFKGVVATLAEWSKGDARWPERPAGVVVLGSQHAPELVAS
LGARIAEVGRLPLLGTIPAGLTTDAASRTNSAQRVRALYGAFEVPAPLADAVRALDGPVL
LVDDMVDSGWTMALAARALNQAGAKGVLPFALAVTA
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
gtgagacaggaagccacgcaagtcctcaaaaagctcgccggacccaccgctgagctgcgc
gaagaccaatggacggcaatcgaggcgctcgtcgccgggcaccgccgggtgctctgcgtc
cagcgcaccggctggggcaagtccgccgtctacttcgtggcgaccgccctcctgcgcgcc
cgcggtgccgggccgacggtgatcgtgtccccgctgctcgccctcatgcgcaaccagacc
gacgcggccgcccgggcgggcatcaccgcccgcaccatcaactcctccaacctcgaggag
tgggacgcgatcaccgccgagatcgccgacggcgcggtcgacgtcctgctggtgagcccc
gagcgcctcaacaacccggcgttccgcgacgacgtgctgcccaagctcgccgccaccacc
gggctcctggtcgtcgacgaggcccactgcgtctccgactggggccacgacttccgcccc
gactaccggcgcctgcgcaccctcctgctcgacctggcccccggcacccccgtgctcgcc
actacggccaccgccaactcccgggtcaccgcggacgtcgccgagcagctgggcgacgcc
ctggtgctgcgcggctcgctcgaccgcgagtccctccgcatgggcgcgctcaccctgccc
tcgccgtcccaccgcctggcctggctggccgagcacctgagggacctcccgggctcgggc
atcatctacacgctgaccgtggccggcgcggaggagacggccgcgttcctgcgcggccag
ggctacgacgtcgcctcctacacgggcaagaccgagggcgccgaccgcctcggcgccgag
gccgacctgctcggcaaccgcatcaaggccctcgtcgccacctcggcgctcggcatgggc
ttcgacaagcccgatctgggcttcgtggtccacctcggcgccccctcgtccccgatcgcc
tactaccagcaggtcggccgcgcgggccgggccgtcgagaaggccgacgtgctgctgctg
ccgggccgcgaggacgcggacatctggcgctacttcgcctcgctcgccttcccgcccgag
catcaggtccgcgaggtcctcgacgccctggccgcggccggccgaccgctgtccacccag
accctggagccccgcgtcgagctccgccacagccgcctcgagctcctcctgaaggtcctc
gacgtcgacggcgccgtccaccgcgtgagcggcggctgggagtccaccggcgtgccgtgg
cagcacgacaccgagcgctatgcccgcattgcgcaggcccgggaagccgagcaggaggcg
atgcgggagtacaccgcgctgacctcctgccgcctggagttcctgcgccgccagctcgac
gaccccgacgccgccccgtgcggccgctgcgacaactgcgcgggcgtatggttcccgacc
gaggtctccccggccgccctggacgccgcccgcggccacctgggccgggccggcgtcgag
atcgccccgcgccgcaagtggccgaccggcatgtccgccgtcggcgtcccggtgaacggc
aacatcccgaagtccgagcagtccctcccgggccgagccatcggccgcctgagcgacctg
ggctggggcgaccgcctccgcgccgccctcaacggccccgacgccccgatctccgacgag
ctcttcaagggcgtggtcgccaccctggccgaatggtcgaagggcgacgcccgctggccc
gagcgcccggccggagtcgtcgtcctcggctcccagcacgcacccgagctggtcgcctcg
ctgggcgcccgcatcgccgaagtgggccgcctacccctcctgggcaccatccctgcgggc
ctgaccactgacgccgcctcccgcaccaactcggcccagcgtgtgcgggccctctacggc
gcgttcgaggtgccggccccgctcgccgacgccgtacgcgccctggacggcccggtcctg
ctcgtcgacgacatggtggacagcggctggaccatggccttggccgcccgcgcgctgaac
caggccggagcgaagggagtactgccgttcgcgctggccgtgaccgcctga
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