Desulfuromonas versatilis: DESUT3_11460
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Entry
DESUT3_11460 CDS
T07752
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
dve
Desulfuromonas versatilis
Pathway
dve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DESUT3_11460 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dve03019
]
DESUT3_11460 (rhlB)
Enzymes [BR:
dve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DESUT3_11460 (rhlB)
Messenger RNA biogenesis [BR:
dve03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DESUT3_11460 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
AAA_11
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
BCR04077
LinkDB
All DBs
Position
1301684..1302955
Genome browser
AA seq
423 aa
AA seq
DB search
MKFTELALPEQVMRGIENMGFTDLTPVQEESIPLALDGRDVAAQAQTGTGKTAAFLISLF
TRLLKQPAETSGDPRALILAPTRELVVQICEDAKGLGIGCPFKVQPIFGGVDYDKQRQAL
QAGVDVIVATPGRLIDYAKQRVFSFKRIEALVIDEADRMFDMGFIRDLRYILRKLPPFEN
RQTMLFSATLSTRVMELAYEFMDLAEKVSIQPEQVTAERVEQILYHAARREKFPLLLGLM
KKEPGADRVLVFVNTKREAEHLTERLKANEFKAAVISGDIPQRKRMRILDDFKEGKLRFL
VATDVASRGIHIEGVTHVVNYDLPQDAEDYVHRIGRTARAGAVGKAISFADEDLVFHLPD
IEEYIGRKIPSDFPHEDDLVWDYKRTTPRKKAPTPEKKGGGEKKPARRRPRRRSQGGRGP
EKA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaccgaactggcactgcccgaacaggtcatgcggggcatcgaaaacatggga
ttcaccgacctgaccccggtccaggaggagtcgatccccctggccctggacgggcgggac
gtggccgcccaggcccaaaccggcaccggcaagaccgcggcgtttctcatctccctgttc
acccgcctgctgaaacagccggctgaaacctccggggatccccgcgccctgatcctggcc
cccacccgggagctggtcgtgcagatctgcgaagacgccaaggggctcggcatcggctgc
cccttcaaggttcagccgatcttcggcggcgtcgactacgacaagcagcgccaggcactc
caggcgggggtcgatgtcatcgtcgccaccccggggcggctgatcgattacgccaagcag
cgggtcttttccttcaagcgcatcgaggcgctggtgattgacgaagccgaccgcatgttc
gacatgggcttcatccgcgacctgcgctacatcctgcgcaagctcccgcccttcgaaaat
cggcagaccatgctgttctcggccacgctctccacccgggtcatggagctggcctacgaa
ttcatggatctggcggaaaaggtctccatccagcccgagcaggtgaccgccgagcgcgtc
gagcagatcctctaccatgcggcgcggcgcgagaagtttccgctgctgctcggcctgatg
aaaaaggaacccggcgccgaccgggtcctggtcttcgtcaacaccaagcgcgaagccgag
cacctcaccgagcggctcaaggccaacgagttcaaggctgcggtaatttccggggacatc
ccccagcgcaagcggatgcggatcctcgacgacttcaaggagggcaagctgcgctttctg
gtggccaccgacgtggcctcgcggggaatccatatcgagggggtcacccacgtcgtcaat
tacgatcttccccaggatgccgaagactatgtccaccgcatcggccgcaccgcccgcgcc
ggggcggtgggcaaggcgatcagcttcgccgatgaggacctggtttttcacctgccggat
atcgaggaatacatcgggcgcaagatccccagcgatttcccccacgaggacgacctggtc
tgggactacaaacgcacaactccccgcaaaaaggcccccactcccgagaaaaaggggggc
ggggagaaaaagccggctcggcgccggccccggcgtcgctcccaaggggggcggggcccg
gaaaaggcctga
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