Desulfuromonas versatilis: DESUT3_21650
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Entry
DESUT3_21650 CDS
T07752
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma-38 factor, stationary phase
KO
K03086
RNA polymerase primary sigma factor
Organism
dve
Desulfuromonas versatilis
Pathway
dve02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dve00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DESUT3_21650 (rpoS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dve03021
]
DESUT3_21650 (rpoS)
Transcription machinery [BR:
dve03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DESUT3_21650 (rpoS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Rrf2
MC3
FAM176
Motif
Other DBs
NCBI-ProteinID:
BCR05096
UniProt:
A0ABM8HS34
LinkDB
All DBs
Position
complement(2443482..2444480)
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AA seq
332 aa
AA seq
DB search
MDETIYDYDDMDLDRDAAEEDDNPEDFTPSEEDQAEDDEKEEEEQEHQYDDHSDDAIKLY
LKEIQKTNLLTAEEERELARRISQGDKSARDRMIESNLRLVVKIAKRYMNRGLPFLDLIE
EGNMGLIKAVERFKLSKECRFSTYATWWIRQSIERALVNQSRTIRLPVHVSDDINKLIKI
SRELVHKFNREPQVNELAEAMGVQPSYVRRLMVLVKKTYSIEHPMGENNDYSLMDTIEDP
SAVDPSTLIEDLNKYAHVAEWLGTLSENEREILTLRFGLDDREPQTLDTIGRRFGVTRER
IRQIEAKSLEKLRKIREEKSAVGIAEAQGEDD
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaacgatctacgactacgacgatatggacctcgatcgcgacgccgccgaagag
gatgataaccctgaggacttcaccccctccgaggaggaccaggccgaggacgacgaaaag
gaagaagaggagcaggagcaccagtacgacgaccattcggacgatgccatcaagctctat
ctcaaggagatccagaagaccaacctgttgaccgccgaagaggagcgggagcttgcccgg
aggatttcccagggggacaagtccgcccgcgaccggatgatcgaatccaacctgcggctg
gtggtgaaaatcgccaagcgctacatgaatcgcggtctgccattcctcgatctgatcgag
gaggggaacatggggctcatcaaggcggtcgaacggttcaagttgagcaaggagtgccgt
ttttccacctacgcaacctggtggatccgccagtccatcgagcgggccctggtcaaccag
agccgcaccatccgcctgccggtgcatgtctcggatgacatcaacaagctgatcaagatc
agccgcgaactggtgcacaaattcaaccgcgaaccccaggtaaacgagctggcggaagcc
atgggagttcaaccgagctatgtcagacgcctcatggtgctggtcaagaagacctactcc
atcgagcaccccatgggggagaacaacgattacagcctcatggataccatcgaggacccc
tccgccgtggacccctcgacgcttatcgaggatctcaacaagtacgcgcacgtggccgag
tggctgggaacgctcagcgaaaacgagagagagatccttaccctgcgctttggactggat
gatcgcgagccccaaaccctcgacaccatcggccgtcgctttggggtgactcgcgaacgc
atccgccagatcgaggcgaaaagtctcgaaaagctcagaaaaatccgggaagaaaaaagc
gctgtcggaatcgcagaggcccagggcgaagacgattga
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