Desulfuromonas versatilis: DESUT3_34330
Help
Entry
DESUT3_34330 CDS
T07752
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dve
Desulfuromonas versatilis
Brite
KEGG Orthology (KO) [BR:
dve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dve03032
]
DESUT3_34330 (topA)
03400 DNA repair and recombination proteins [BR:
dve03400
]
DESUT3_34330 (topA)
Enzymes [BR:
dve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DESUT3_34330 (topA)
DNA replication proteins [BR:
dve03032
]
Prokaryotic type
DNA Topoisomerases
DESUT3_34330 (topA)
DNA repair and recombination proteins [BR:
dve03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DESUT3_34330 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
BCR06364
LinkDB
All DBs
Position
3850634..3853003
Genome browser
AA seq
789 aa
AA seq
DB search
MAKSLVIVESPAKAKTIEKFLGKGFKVLASYGHVRALPSKQGMVDVEHEFEPHYHVLPES
RKQIDLLKKEASSSDELILATDLDREGEAIAWHLLEALGIDEDSAKPKVKRVTFHEITKK
AIQQAMAEPRRVSRDLVDAQQARSVLDYLVGFNLSPFLWKKIRYGLSAGRVQSVALRLIC
EREKAIEDFVSQEYWTIDAQLGAAKGAEFKARLAAVDGKKLDKFDIADQTQAEQLVAEIA
QQSFRVAAITRSEKKRNPAAPFTTSTLQQEASRKLGFSARKTMSVAQKLYEGIDIGEGSV
GLITYMRTDSVALSEEATTEARQVISAMYGSEYALPQPRVYKSKAKNAQEAHEAIRPTSI
ANLPEQIKSHLSSDQYRLYRLIWLRTVASQMAAAILDATSVDIAAGERFTFRASGQVIRF
PGFMKAYIEGTDEATEEQEGTLPPLDEGEALAQKGLLPEQHFTQPPPRFTEASLVKTLEE
YGIGRPSTYASIMNTLVQRKYVRLEKRTFFPEDVGRVVNDLLVNHFQQYVDYDFTAKLEE
DLDAISRGEEKWRPVLKEFWDPFISLLKKKEQEVKKEEVTTEKTDRSCPECSQPLVIKLG
RSGKFLACSGFPECRHTEPLSGEEQEEPEVSDEKCDKCGAPMLIKSGRYGKFLACSAYPG
CKNIQPLVKPKALGITCPDCKEGELMEKKSRYGKIFYSCNRYPKCKYALWDQPIAEACPK
CSFPVIVEKVTKRYGTFRKCPQEGCDWKLELVPPEKKAAPAKTTAKKAPAKKATAKKAAP
KAAPKKKTE
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatcactggtaatcgtcgagtccccggccaaggcgaaaaccattgaaaagttt
ctcggcaagggattcaaggtactggcctcctacggacacgtgcgtgccctgcccagcaag
caggggatggtggatgtcgaacacgaattcgagccccactatcatgttctgcctgaaagc
cgcaagcagatcgacctgctgaaaaaggaagccagctccagcgacgaactgatcctcgcc
accgacctcgaccgcgagggagaggcgatcgcctggcacctgctcgaggccctggggatc
gacgaggacagcgccaagcccaaggtcaagcgagtcaccttccacgagatcaccaagaag
gccatccagcaggccatggccgaaccgcggcgcgtctcgcgcgacctggtcgacgcccag
caggcccgttcggtgctcgactacctggtcggcttcaacctctcgccctttctctggaag
aagatccgctacggactctccgccggccgcgtccaatcggtggccctgcgcctgatctgc
gagcgggaaaaagcgatcgaggacttcgtcagccaggagtactggaccatcgacgcccag
ctcggggccgccaagggcgccgagttcaaggcccgcctggccgccgtcgacggcaagaag
ctcgacaagttcgacatcgccgaccagacccaagccgagcagctggtagcggagatcgcc
cagcagagtttccgcgtcgccgccatcacccgcagcgaaaagaagcgcaaccccgccgcc
cctttcaccaccagcaccctgcagcaggaggccagccgcaagctcggcttctcggcgcgc
aagaccatgtcggtggcgcagaagctctacgaggggatcgacatcggcgagggctcggtc
ggtctgatcacctacatgcgtaccgactcggtggccctctccgaggaggccaccaccgag
gcgcgccaggtgatcagcgccatgtacggcagcgagtacgccctgccccagccccgggtc
tacaagagcaaggcgaagaacgcccaggaggcccacgaggcgatccgcccgacctccatc
gccaacctccccgagcagatcaagtcgcatctgagctccgaccaataccggctctaccgg
ctgatctggctgcgcaccgtggcctcgcagatggccgccgcgatcctcgacgccaccagc
gtcgacatcgccgccggcgagcgcttcaccttccgcgccagcgggcaggtgatccgcttc
cccggcttcatgaaggcctacatcgaggggaccgacgaggccaccgaggagcaggagggg
accctgccgccgctggacgaaggggaagccctggcgcagaaagggctgctgcccgagcag
cacttcacccagccgccgccgcgcttcaccgaggccagcctggtcaagaccctcgaggag
tacggcatcggccgcccctcgacctacgcctcgatcatgaacaccctggtgcagcgcaag
tacgtgcgcctggaaaagcgcaccttcttccccgaggacgtcggtcgggtggtcaacgac
ctgctggtcaaccatttccagcagtacgtcgactacgacttcaccgccaaactcgaggag
gacctcgacgccatctcccgcggcgaggagaagtggcgcccggtgctcaaggagttctgg
gatcccttcatctccctgctcaaaaagaaggagcaggaggtcaagaaggaagaggtcacc
accgaaaagaccgaccgcagctgccccgaatgcagccagccgctggtcatcaagctcggc
cgctccggcaagttcctggcctgttcgggcttccccgagtgccgccacaccgagcccctc
tccggcgaggagcaggaggaacccgaggtttccgacgagaagtgcgacaagtgcggcgcg
ccgatgctgatcaagtcgggccgttacggcaaatttttggcctgctcggcctaccccggc
tgcaagaacatccagccgctggtcaagcccaaggccctgggcatcacctgccccgactgc
aaagagggggagctgatggagaagaagagccgttacggcaagatcttctactcctgcaac
cgctaccccaagtgcaagtacgccctgtgggaccagccgattgccgaagcctgtccgaaa
tgcagcttcccggtgatcgtcgaaaaggtcaccaagcgctacggcaccttccgcaagtgc
ccccaggaaggctgcgactggaagctcgagctggtgccgccggagaaaaaggccgccccg
gccaaaactaccgccaaaaaggctcctgcgaaaaaagcgactgcgaaaaaggctgctcca
aaagctgcgcctaagaaaaaaaccgagtag
DBGET
integrated database retrieval system
