Nitratidesulfovibrio vulgaris RCH1: Deval_0035
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Entry
Deval_0035 CDS
T02064
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dvg
Nitratidesulfovibrio vulgaris RCH1
Brite
KEGG Orthology (KO) [BR:
dvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dvg03032
]
Deval_0035
03400 DNA repair and recombination proteins [BR:
dvg03400
]
Deval_0035
Enzymes [BR:
dvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Deval_0035
DNA replication proteins [BR:
dvg03032
]
Prokaryotic type
DNA Topoisomerases
Deval_0035
DNA repair and recombination proteins [BR:
dvg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Deval_0035
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ADP85206
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Position
44718..47114
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AA seq
798 aa
AA seq
DB search
MTTGTGNNYTADSITILEGLSAVRKRPAMYIGSTDARGLHHLVYEVVDNSIDEAMAGFCS
KVVVKLHLDNSVTVSDNGRGIPVDMHPKEGRPAVEVVMTKLHAGGKFDNNAYKVSGGLHG
VGVSCVNALSEWLEVRVKRDGQRYGQRYARGVPQEDLRVLGASEGHGTTVRFKPDEEIFE
TNQFSYETLRKRFEELSYLNRGLEIEFIDERSGESHTFFAEGGIRQFVKDLNSGETGIHP
IVAGEGKTDGVVVDFALQYNAGYKENVLTFANNIRTKEGGTHLAGFKTALTRAINGYVKG
QADLTKKMKGTALSGDDVREGLTAVVSVKLPQPQFEGQTKTKLGNSEIAGIVAGIVYDRL
NVHFEENPKDVRLIIDKAVDAARARDAARRAKELVRRKGALSDNALPGKLADCQSKDPAL
SELFIVEGDSAGGSAKQGRDPSTQAILPLRGKILNTERTRFDKMLANKEVKALITAMGAG
IGEDDTDYDKLRYHKIVIMTDADVDGAHIRTLLLTFFFRQYQKLIESGYLYIAQPPLYRA
HNSRMERFIKDDAELNNFLLTRVSEDVEVRTPGGCSFKGTDIVRLMRSIETVAARIRDVE
TAGISRELFLGFLEYGERITPEWFEQHDGNGLRPWLAGRGYSMTAELESGDEGDRTFVVF
ENTNGHRTRIGAEFFGSRMYRSSWDALEAIRSECGGLSFTLDRKGETVGEGDMFDLQRMV
FEEARRGLNIQRYKGLGEMNPEQLWVTTMNPENRTLLQVSIEDAEEASDAFEQLMGDRVE
PRREFIVRNALAVQELDI
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgggacgggcaacaactataccgcagacagcatcaccatcctcgagggcctt
tctgcggtgcgcaaacgccccgcgatgtacatcggttccaccgatgcacgcgggctgcac
caccttgtctacgaagtcgtggacaactccatcgacgaagccatggccggcttctgctcc
aaggtggtggtcaagctgcacctcgacaacagcgtgaccgtcagcgacaacggacgcggc
atccccgtggacatgcaccccaaggagggcagacccgcggtggaggtcgtcatgaccaag
ctgcacgcggggggcaagttcgacaacaacgcctacaaggtctccggcggtctgcatggc
gttggcgtgagctgcgtcaacgcgctttcggaatggctcgaagtccgggtgaagcgcgac
gggcaacggtacgggcagcgctatgcccgtggcgtaccgcaggaggacctgcgtgtcctc
ggcgcatccgaaggccacggcaccacggtgcgcttcaagcctgacgaggagattttcgag
accaaccagttctcctacgagaccctgcgcaagcgcttcgaagaactgtcctacctcaac
cgcgggcttgagatagagttcatcgacgaacgcagcggcgaatcgcacaccttcttcgcc
gaaggcggcatccgccagttcgtcaaggacctcaattcgggcgagaccggcatccatccc
atcgtggcgggtgaaggcaagaccgatggcgtggtggtcgacttcgccctgcagtacaat
gcggggtacaaggagaacgtgctcaccttcgccaacaacatccgcaccaaggaaggcggc
acgcacctcgcgggcttcaagacggcgctcacccgcgccatcaacggctatgtgaagggg
caggccgacctcaccaagaagatgaagggcactgcgctttccggcgacgacgtgcgcgag
ggcctcacggccgtggtcagcgtgaagctgccgcaaccgcagttcgaaggccagaccaag
accaagctgggcaacagcgagatagcgggcatcgtggcgggtatcgtctacgatcgcctg
aacgtgcatttcgaggagaaccccaaggacgtgcggctcatcatcgacaaggccgtcgat
gccgcccgcgcccgtgacgcagcccgccgcgccaaggaactcgtgcgccgcaagggcgcg
ctctccgacaacgccctgccgggcaagcttgccgactgccagtccaaggaccccgcgctg
agcgaactcttcatcgtcgagggcgactccgcaggcggttcggccaagcagggccgcgac
ccgtcgacgcaggccatccttcccctgcgcggcaagattctcaacaccgaacgcacgcgc
ttcgacaagatgctggccaacaaggaagtgaaggccctcatcaccgccatgggcgcgggc
atcggcgaggacgacacggactacgacaagctgcgctatcacaagatcgtcatcatgacc
gacgccgacgtggacggtgcgcacatccgtacgctgctgctcacgttcttcttccgccag
taccagaagcttatcgaaagcggctatctgtacatcgcccagccgcctctctaccgtgcg
cataacagccgcatggaacggttcatcaaggacgacgcggaactcaacaacttcctgctg
acccgcgtgagcgaggacgttgaggtgagaacccccggcggctgctctttcaagggcacc
gacatcgtacggctcatgcgttccatcgagacggtggctgcgcgcatccgcgacgtggag
acggcgggcatctcgcgtgaactgttcctcggcttcctcgagtatggcgagcgcatcaca
ccggaatggttcgagcagcatgacggcaacggactgcggccctggctggcaggacgtggc
tattccatgacggctgaacttgaatcgggcgacgagggcgaccgcacgttcgtggtgttc
gagaacaccaacggtcacaggacacgcatcggtgcggagttcttcggttcgcgcatgtac
cgcagttcgtgggatgccctcgaggccatacgcagcgaatgcggcgggctctccttcacg
ctcgaccgcaagggagagaccgtgggtgagggtgacatgttcgacctgcaacgcatggtc
ttcgaagaggcacgccgcggtctgaacatccagcgctacaagggtcttggcgagatgaac
cccgagcagctgtgggtgaccaccatgaaccccgaaaaccgtaccctgcttcaggtgtcc
atcgaggacgccgaagaggcgagcgacgctttcgaacagctcatgggcgaccgggtcgaa
ccccggcgcgagttcatcgtgcgtaacgccctcgccgtgcaggaactcgacatatag
DBGET
integrated database retrieval system
