Nitratidesulfovibrio vulgaris RCH1: Deval_0461
Help
Entry
Deval_0461 CDS
T02064
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dvg
Nitratidesulfovibrio vulgaris RCH1
Pathway
dvg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Deval_0461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvg03019
]
Deval_0461
03016 Transfer RNA biogenesis [BR:
dvg03016
]
Deval_0461
Enzymes [BR:
dvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Deval_0461
Messenger RNA biogenesis [BR:
dvg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Deval_0461
Transfer RNA biogenesis [BR:
dvg03016
]
Prokaryotic type
tRNA degradation factors
Deval_0461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH-I_KHDC4-BBP
KH_2
KH_NusA_2nd
Eno-Rase_NADH_b
Motif
Other DBs
NCBI-ProteinID:
ADP85630
LinkDB
All DBs
Position
complement(579529..581811)
Genome browser
AA seq
760 aa
AA seq
DB search
MTNIFNAMRVTATVGGKEIVFETGRLANQADGAVWIQCGGTVVLVTACSQATDRDLGFFP
LTVEYSEKMYAAGRIPGSFFRREIGRPSERETLVSRLIDRPIRPLFPKGLKDEVQVLANV
ISSDQNNDSDVLAVTGASTALGLSSIPFDGPVAGARIGRIDGQFVINPTIKEMERSDLNI
VLAASRDAVVMVEGEASFVPEAVIVEALEWGHKEIQPLIDAQLKLREMAGKAKREFTAPV
EDADLAARVAALATADLDVALRIPEKMARKDARKAVKEKVMEALVADPAYAEDTTPLRAV
GDILSALEKRIVRERIVREGRRIDGRDTTTVRPILIEAGILPRAHGSALFARGETKSLVV
ATLGSSTDEQRMDSLTGDVTKRFMLHYNFAPYCVGEVKPVRVSRREIGHGALAEKALRPI
LPLGEDFPFTLRVVAETMESNGSSSMAAVCGGCLSLMDAGVPITAPVAGVAMGLIKEGDQ
YVVLTDILGDEDALGDMDFKIAGTSEGITAVQMDIKVKGLPTDVMARAMQQARDARLHIL
GEMGKVLEAPRAELSAYAPQHAEVFVNPDIIRIIIGPGGKNIKAITATTGASIDIEDSGR
VSIFAPTLEAMEMAREMVQYYDQRADIGKNYTGKVRKVLEIGAIVEILPNLEALVHISQL
DTNRVEQASDVARLGEDMVVKVIEINGDRIRASRKAVLLEEQGIEWKPEDTARPSGPREG
GRRDGGRDGRRDGGRDGRRDGGRDGGRRDGGRRDGGRDRN
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatatattcaacgccatgcgcgtcaccgccactgtcggcggcaaggagatcgtc
ttcgagacaggtcgcctcgccaatcaggccgatggtgccgtgtggatacagtgcggcggt
accgtggtgctcgtcaccgcgtgctcgcaagccactgaccgcgacctcggcttcttcccg
ctcaccgtcgaatactccgagaagatgtacgccgccggccgcatccccggcagcttcttc
cgacgcgagatcggccgccccagcgagcgcgagaccctcgtctcccgcctcatcgaccgc
cccatccgtccgctcttccccaagggcctcaaggatgaggtgcaggtgctcgccaacgtc
atctcctccgaccagaacaacgactccgacgtgctcgccgtcaccggcgcctccaccgca
ctcggcctgtcgtccatcccgttcgacggcccggtcgccggtgcgcgcatcggtcgcatc
gacggtcagttcgtcatcaaccccaccatcaaggagatggagcgcagcgacctcaacatc
gtgctcgccgcctcgcgtgatgccgtggtgatggtcgaaggcgaagccagcttcgtgccc
gaagcggtcatcgtcgaagccctcgaatggggtcacaaggaaatccagcccctcatcgac
gcacagctgaagctgcgcgagatggctggcaaggccaagcgcgagttcaccgcaccggtc
gaagatgcagaccttgccgcacgtgtggccgcccttgccaccgcagaccttgacgtagcc
cttcgcattcccgagaagatggcccgcaaggatgcccgcaaggccgtcaaggagaaggtg
atggaggcccttgtggccgaccccgcctacgccgaagacaccactccgctgcgcgccgtg
ggcgacatcctctctgcgcttgagaagcgcatcgtgcgcgaacgcatcgtgcgcgaaggc
cgccgcatcgacggtcgcgacaccaccaccgttcgccccattctcatcgaagcgggcatc
ctgccccgcgcccatggttccgccctgttcgcgcgcggcgagaccaagtcgctggtcgtg
gccaccctcggtagttccaccgacgaacagcgcatggactcgctgaccggcgacgtcacc
aagcgcttcatgctgcactacaacttcgccccctactgcgtgggtgaagtgaagcccgtg
cgcgtctcccgccgcgaaatcggccacggcgcactggccgaaaaggccctgcgtcccatc
ctgcccctcggcgaagactttcccttcaccctgcgcgtggtcgccgagacgatggaatcc
aacggttcgtcgtccatggccgccgtctgcggcggctgcctctcgctgatggacgccggt
gtgcccatcaccgcccctgtggccggtgtggccatgggcctcatcaaggagggcgaccag
tacgtggtgctcaccgacatcctcggtgacgaagacgccctcggcgacatggacttcaag
atagccggtaccagcgaaggcatcacggctgtccagatggacatcaaggtcaagggcctg
cccaccgatgtcatggcccgcgccatgcagcaggcccgtgatgcgcgcctgcacatcctc
ggcgagatgggcaaggttctcgaagccccccgtgccgaactttccgcctacgcgccgcag
catgccgaggtgttcgtcaaccccgacatcatccgcatcatcatcggccccggcggcaag
aacatcaaggccatcaccgccaccaccggcgcgtccatcgacatcgaggacagcggccgc
gtctccatcttcgcgcccacgctcgaagccatggaaatggcccgcgagatggtgcagtac
tacgaccagcgcgccgacatcggcaagaactacaccggcaaggtgcgcaaggtcctcgaa
atcggcgccatcgtcgaaatcctgcccaacctcgaagccctcgtgcacatctcgcagctt
gacaccaacagggtcgagcaggcgtccgacgtggcccgcctcggcgaggacatggtcgtg
aaggtcatcgagatcaacggcgaccgcatccgcgccagccgcaaggccgtcctgcttgaa
gagcagggcatcgaatggaagcccgaagacaccgctcgcccctccggtccccgcgaaggt
ggacgccgtgacggcggacgtgatggtcgccgcgacggcggtcgtgacggtcgccgtgat
ggcggacgtgacggtggtcgccgcgatggcggacgtcgcgacggcggacgcgaccgcaac
taa
DBGET
integrated database retrieval system
