Nitratidesulfovibrio vulgaris RCH1: Deval_0825
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Entry
Deval_0825 CDS
T02064
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dvg
Nitratidesulfovibrio vulgaris RCH1
Pathway
dvg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Deval_0825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dvg03400
]
Deval_0825
Enzymes [BR:
dvg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Deval_0825
DNA repair and recombination proteins [BR:
dvg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Deval_0825
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
AAA_11
Viral_helicase1
PIF1
UvrD-helicase
NAT10_TcmA_helicase
AAA_28
MeaB
AAA_29
nSTAND3
AAA_22
AAA
AAA_16
NTPase_1
NPHP3_N
RsgA_GTPase
ABC_tran
PhoH
TrwB_AAD_bind
SLFN-g3_helicase
DEAD
NB-ARC
HHH_2
nSTAND_NTPase5
HHH_6
TsaE
Zeta_toxin
ATPase_2
T2SSE
AAA_23
MobB
cobW
Motif
Other DBs
NCBI-ProteinID:
ADP85989
LinkDB
All DBs
Position
990757..992985
Genome browser
AA seq
742 aa
AA seq
DB search
MQTGKTATTEEQTAEALEELEGTLERVIFHNAENGYTVFRFQPKGKGGDAVSVVGHMVDP
QPGVGLLLRGGWVNNPKFGRQFRMETFESVLPATVEGIRHYLGSGLIKGVGETMAARIVA
RFGESTFSVLDDAPDRLIEVEGVGAKTLERIKTSWAEHRGIRDLIMFLQPHGVSTAYAVR
IYRYYGTHALTVVRENPYRLAMDIHGIGFITADGVATKLGFSKDSPLRAEAGVLYMLGRL
TEDGHVYFPFDGLVTHTGDKLDIRYDLVEDAIHSLEREERVVLEDLGEGVGVFLTRFHHY
ETKIAYYLRRVLASPKAVHFENPDAVVDKVLGKLDIALAPEQLEAVRTSTRSKVMVLTGG
PGTGKTTIINAIIRVFAEVGARILLAAPTGRAAKRMSETSGRESRTIHRLLEFSPKEDGF
ARNEDNPLACGLLVVDEASMMDTMLMYHLLKAVPLGATLLFVGDVHQLPSVGPGNVLRDV
IVSGVVPVVELREVFRQAAESEIICNAHRINQGEVPPLESSRDRLSDFYFIRQSDPAKVV
EMILELVRDHIPRRFGLHPVDDIQVLTPMHKGLAGAGNLNLRLQEALNPQTLCVQRGERQ
FRLDDKVMQIRNNYEKDVYNGDIGRICCVNAKERELTVRYDERNVIYAWEELDEIVPAYA
ISVHKSQGSEYPAVVIPVLTQHYVLLQRNLIYTGVTRGKRLVVLVGESRALAMAVKNNRM
QKRHTWLAHRLAQGLSTPGALL
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccggaaagaccgccaccacggaagagcagaccgccgaagcccttgaagaactg
gagggcaccctcgagcgcgtcatcttccacaatgccgagaacggctacacggtgttccgc
ttccagcccaagggcaagggaggcgatgccgtcagcgtggtggggcacatggtcgacccg
caacccggcgtgggcttgctgctgcgtggcgggtgggtgaacaaccccaagttcggtcgt
cagttccgcatggagaccttcgagagtgttctgcccgccaccgtagagggcatccgccac
tatctcgggtcggggctgatcaagggggtgggcgagaccatggccgcgcgcatcgtcgcc
cggttcggcgagtcgaccttcagcgtgctggacgatgcgcccgaccgcctcatcgaggtc
gaaggcgtgggggccaagacgctggaacgcatcaagaccagctgggccgagcaccggggc
atccgcgacctcatcatgttcctgcaaccgcatggcgtgagcaccgcctatgccgtccgc
atctacaggtactacggcacgcatgcgctcaccgtggtacgcgagaatccgtatcgcctc
gccatggacatccacggcatcggcttcatcaccgccgacggggtggccaccaaactcggt
ttttccaaggacagccccctgcgcgccgaggcgggggtgctgtacatgctaggtcgtctg
acggaagacgggcatgtctactttcccttcgacggactggtgacgcatacgggtgataaa
ctcgacatccgttacgaccttgtcgaggacgccatccactcgcttgagcgagaggagagg
gtcgtgctcgaagaccttggcgaaggcgtaggggtcttcctcacccgtttccaccactac
gagacgaagatagcctactacctgcggcgcgtactggcttcgcccaaggccgtgcacttc
gagaatcccgacgccgtggtggacaaggtactgggcaagctcgacatcgcccttgcgccg
gaacagcttgaggcggtgcgcaccagcacccgcagcaaggtcatggtgctcaccgggggg
ccgggtacgggcaagaccaccatcatcaacgccatcatccgcgtcttcgccgaggtgggg
gcacgcatcctgcttgccgcgcccaccggacgcgccgccaagcgcatgtccgagacaagc
gggcgcgagtcgcgcaccatccaccgcctgctggagttcagccccaaagaggatggcttc
gcccgtaacgaggacaaccccctcgcctgcgggctgctggtggtggacgaagcctcgatg
atggacaccatgctcatgtaccacctgctgaaggccgtgccgctaggggcgacgctgctc
ttcgtgggtgatgtgcaccagttgccgtcggtggggccgggcaacgtgctgcgcgatgtc
atcgtctccggcgtggtgccggtggtggaattgcgcgaggtgttccgtcaggccgccgag
agcgagatcatctgcaacgcccaccgcatcaatcagggcgaggtgccgcctctcgaatca
tcgcgcgacaggctttccgacttctatttcatccggcagtccgaccccgccaaggtcgtg
gagatgatcctcgaactggtgcgcgaccacatcccccgtcgcttcgggctgcatcccgtc
gatgacatccaggtgctcacgcccatgcacaaggggcttgcgggtgcgggcaacctcaac
ctgcgcctgcaggaggccctcaacccccagaccctctgcgtgcagcggggcgagcgtcag
ttccgtctcgacgacaaggtcatgcagatacgcaacaactacgagaaggatgtctataac
ggcgacatcgggcgtatctgctgcgtcaacgccaaggagcgcgagctcaccgtccgctac
gatgaacgcaatgtcatctatgcgtgggaagagcttgacgagattgtgcccgcgtacgcc
atctcggtacacaagtcgcaggggtcggagtatcctgctgtggtcattccggtgctcacg
cagcattacgtccttctgcaacgcaatctcatctacaccggggtcacgcggggcaaacgg
cttgtggtgctcgtcggcgaatcgcgtgcgcttgccatggcggtgaagaacaaccggatg
cagaagcgtcatacatggctggcgcacaggctggcgcaggggctttccacccccggcgcg
ctcctctga
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