Nitratidesulfovibrio vulgaris RCH1: Deval_0854
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Entry
Deval_0854 CDS
T02064
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
dvg
Nitratidesulfovibrio vulgaris RCH1
Brite
KEGG Orthology (KO) [BR:
dvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dvg03009
]
Deval_0854
Enzymes [BR:
dvg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Deval_0854
Ribosome biogenesis [BR:
dvg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Deval_0854
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_25
MTS
Methyltransf_31
Methyltransf_15
Methyltransf_11
Cons_hypoth95
Methyltransf_12
UPF0020
TRM5-TYW2_MTfase
Methyltransf_32
DUF269
Motif
Other DBs
NCBI-ProteinID:
ADP86018
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Position
complement(1018037..1019443)
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AA seq
468 aa
AA seq
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METFANGMTLDVTVDALAPGGKAVCRHEGRVIFVDRGLPGQQLHVRLTTVRKRFAEAECL
AVVTHTADECDPFCPHFGDCGGCTWQNLPYPAQLAWKERFVRDSLQRIGRIEAPNVLPTL
PSPLQQGFRNKMEFAFTTDDREMLHLGLRRRGGHEVVDVTSCGLQTATTCRVVTTARDIA
RASGLPGWDDAAHRGFWRFLVVREPARGGQCLVQCITAPHPEAEHVARAFFTALRQAVPE
VTGCVHSIRSQNSQVAYGDATVFTEGEIVLTEKLGAIELDFGHDTFLQTNTRATELLYGE
VERMAGLSGREHVWDLYCGVGSIALWLAEHAATICGMEATPASVEAAQRNAQAAGCTHCD
FVAGDVRALLRSRSKGKAQEPIPDVVVTDPPRAGMHPDVIDALLQTAPARIVYVSCDPAT
MARDVGLLMQRYTLHEARPVDLFPHTPHVETVVLLSNKEVDDTISTTV
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggaaacattcgcaaacggcatgacgctcgacgtcacggtcgatgccctcgcgccgggc
ggcaaggccgtctgccgccatgaagggcgcgtcatcttcgtcgaccgcggtctgcctggc
cagcagcttcatgtccgcctcacgactgtgcgcaaacgcttcgcagaggctgaatgcctt
gccgttgtcactcacaccgcagacgagtgcgacccgttctgcccgcacttcggcgactgt
ggcggctgcacatggcagaacctgccctacccggcccaactggcgtggaaggaacgcttc
gtccgtgacagcctgcaacgcatcgggcgcatcgaagcccccaatgtactgcccacgctc
ccttcgccgctgcaacagggctttcgcaacaagatggagttcgccttcaccacggatgac
cgggagatgcttcatctgggactgcgccggcggggggggcacgaggtcgtggatgtgacg
tcgtgcgggcttcagactgccacaacctgccgcgtcgtcacgacggcacgtgacatcgca
cgcgcatcgggtcttcccggctgggacgacgcggctcatcgcggcttctggcgctttctc
gtcgtgcgtgagcccgcaaggggggggcagtgcctcgtccagtgcatcaccgccccgcac
ccggaggccgaacatgtcgcgcgtgcctttttcaccgccctgcgtcaggcagtgccggag
gtcacgggctgcgtccactccatccgctcgcagaactcgcaagtggcttacggcgacgcg
accgtcttcaccgaaggtgagattgtactgacagaaaagctgggcgccatcgaactcgac
ttcgggcacgacaccttcctgcagaccaacacccgcgccacagaactcctgtatggcgaa
gtggagcgcatggcaggcctgagcggacgcgaacatgtctgggacctctactgcggtgtg
ggatccattgccctgtggctggcggaacacgcagcgacaatctgcggcatggaggcgacg
cctgcatccgtcgaagcagcccaaaggaacgcgcaggcagcaggctgcacccactgcgat
ttcgtcgccggggatgtacgggcactgctccgttctcgcagcaaaggcaaagctcaagaa
cccatccctgacgtggtggtcacagacccccctcgcgccggcatgcatcctgatgtgata
gacgcacttcttcagacggcaccggcacgcatcgtctatgtatcatgcgatccagcgacg
atggctcgtgacgtgggcctgctcatgcagcgctatacactgcacgaagcgcgccctgtc
gacctttttccgcatacgccacacgtcgagacggttgtcctgctctcaaacaaagaagta
gacgacacaatcagcacgactgtatag
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