Nitratidesulfovibrio vulgaris RCH1: Deval_1111
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Entry
Deval_1111 CDS
T02064
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
dvg
Nitratidesulfovibrio vulgaris RCH1
Pathway
dvg00260
Glycine, serine and threonine metabolism
dvg00460
Cyanoamino acid metabolism
dvg00630
Glyoxylate and dicarboxylate metabolism
dvg00670
One carbon pool by folate
dvg00680
Methane metabolism
dvg01100
Metabolic pathways
dvg01110
Biosynthesis of secondary metabolites
dvg01120
Microbial metabolism in diverse environments
dvg01200
Carbon metabolism
dvg01230
Biosynthesis of amino acids
dvg01240
Biosynthesis of cofactors
dvg04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
dvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Deval_1111
09102 Energy metabolism
00680 Methane metabolism
Deval_1111
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Deval_1111
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Deval_1111
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Deval_1111
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Deval_1111
Enzymes [BR:
dvg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Deval_1111
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ADP86272
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Position
complement(1297862..1299100)
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AA seq
412 aa
AA seq
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MDELLLQDPEVGKAIILEIERQTGKLELIASENFVSAAVRQAQGSVLTHKYAEGYPGKRY
YGGCEFVDIAENIAIERARTIFGCEYANVQPHSGSQANMGVYFACLKPGDTILGMNLSHG
GHLTHGSPVNFSGRLFNVVFYGVEKETGRIDYEQVAALAREHKPSLIVAGASAYPRTIDF
ARFRAIADEVGAKLMVDMAHIAGLVAAGYHPSPVQHAHYTTTTTHKTLRGPRGGMILSTE
DNGKTLNSQIFPGIQGGPLMHVIAAKAVAFGEALRPAFKEYQKQVVDNAAALAGVLTAAG
FDLVSGGTDNHLMLVDLTSKDVTGKDAEIALDKAGITVNKNTVPFETRSPFVTSGVRLGT
PALTTRGMKAAEMEKVGGWIVDAIANTTNETRLAEISREVERFARQFPLFAW
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggacgagttgctgcttcaggaccccgaggtcggcaaggccatcattctcgaaatcgaa
cgtcagaccggcaagcttgagctcatcgcgtcggagaacttcgtctccgccgccgtccgg
caggctcagggcagcgtcctcacccacaagtacgccgaaggctaccccggcaagcgctac
tacggcggatgcgagttcgtcgacatcgccgagaacatcgccatcgaacgcgcccgcacc
atcttcggctgcgaatacgccaacgtgcagccccattcgggcagtcaggccaacatgggt
gtctatttcgcgtgcctcaagcccggcgacaccatcctcggcatgaatctctcgcacggc
ggtcacctgacgcacggcagccccgtcaacttttccggtcgtctcttcaacgtggtgttc
tacggtgtcgagaaggagactggccgcatagactacgagcaggtggccgcactcgcacgc
gagcacaagccctccctcatcgtcgccggtgctagcgcctacccccgcaccatcgacttc
gcccgtttccgcgccatcgcagatgaagtgggcgcgaagctcatggtcgacatggcccac
atcgcaggtctggtcgccgctggctaccaccccagccccgtgcagcacgcccactacacc
acgaccaccacgcacaagacgctccgcggcccgcgcggtggcatgatcctctccaccgag
gacaacggcaagacgctgaacagccagatattccccggcattcagggcggcccgctcatg
catgtcatcgccgccaaggccgtggccttcggcgaggcactgcgccccgcgttcaaggag
taccagaagcaggtggtggacaacgccgccgcccttgccggtgtgctcaccgccgccggg
ttcgatctcgtttcgggcggtaccgacaaccacctgatgctggtcgacctcaccagcaag
gacgtcaccggcaaggacgccgagatagccctcgacaaggcgggcatcaccgtcaacaag
aacaccgtcccgttcgagacccgttcgcccttcgtgacctccggtgtgcgtctcggcacc
ccggccctcaccacccgcggcatgaaggccgccgagatggagaaggtgggcggatggatc
gtggacgccatcgccaacaccaccaatgagacccgactggcggagatcagccgcgaagtg
gaacgcttcgcacggcagttccccctgttcgcatggtag
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