Nitratidesulfovibrio vulgaris RCH1: Deval_1130
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Entry
Deval_1130 CDS
T02064
Name
(GenBank) apurinic endonuclease Apn1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
dvg
Nitratidesulfovibrio vulgaris RCH1
Pathway
dvg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Deval_1130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dvg03400
]
Deval_1130
Enzymes [BR:
dvg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Deval_1130
DNA repair and recombination proteins [BR:
dvg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Deval_1130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
tRNA-Thr_ED
Motif
Other DBs
NCBI-ProteinID:
ADP86291
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Position
1319188..1320036
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AA seq
282 aa
AA seq
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MPLFGAHMSAAGGVSNAIRDIVEIGGEVLQLFTANQRQWTPKAPSEADVEAFGRRRAAFG
GPVFSHASYLINIANGDGAASAKAVEALVREFERCTALGVDAVVLHPGAHLGAGRGTGIL
RAARNIDEVFDRCGGQTPVLLLENTAGQGTCLGGDLNDLAEIIDASRHASQLGVCLDTAH
AFGAGYALHTDEGYRRCMEDIEHGPGLAAVRLFHVNDSLVPCGSRKDRHTHIGEGQLGEA
AFVRLLNDPVFAMHPMVLETPKEDGHAADRRNLATLRRLARS
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgttcggagcccacatgtccgccgctggcggagtatccaacgccattcgcgat
atcgtcgagattggcggcgaagtgctgcaactgttcactgccaatcagcggcagtggacg
cccaaggccccgtcagaggctgacgtcgaggcgttcgggcgccgtcgtgcggcgttcggg
gggccggtgttctcccatgcctcgtacctcatcaacatcgccaacggggatggggcggca
tcggcgaaggcggtggaggcccttgtgcgcgagttcgagcgttgtaccgccctcggcgtg
gatgcggtggtgctccatcccggtgcgcacctcggggcaggccggggtacgggcatcctg
cgggccgcccggaacattgatgaggtgttcgacaggtgcggggggcagacgcctgtactg
ctgctggagaacaccgcagggcagggtacctgtctcggaggtgatctgaacgaccttgcg
gagatcatcgacgcctcgcgccatgcctcacagcttggagtctgcctcgatacggcccat
gccttcggtgcaggctatgccctgcataccgatgagggctaccgtcgttgcatggaggac
atcgaacacggccccgggctggcggccgtgcgcctgtttcatgtgaacgacagccttgtg
ccgtgtggaagccgcaaggacaggcatacgcatatcggcgaggggcaactgggtgaggcc
gcctttgtccgcctcctgaacgacccggtctttgcgatgcaccccatggttcttgagaca
cccaaagaggacggccatgccgcggacaggcgtaatcttgccacgcttcgtcggcttgcc
agaagttga
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