Nitratidesulfovibrio vulgaris RCH1: Deval_1183
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Entry
Deval_1183 CDS
T02064
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dvg
Nitratidesulfovibrio vulgaris RCH1
Pathway
dvg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Deval_1183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dvg03400
]
Deval_1183
Enzymes [BR:
dvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Deval_1183
DNA repair and recombination proteins [BR:
dvg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Deval_1183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_PriA
DEAD
PriA_C
ResIII
Helicase_C
PriA_3primeBD
AAA_30
Zn_ribbon_6
SRP54
Trm112p
IBR_1
Zn_Ribbon_YjdM
Motif
Other DBs
NCBI-ProteinID:
ADP86344
LinkDB
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Position
1380394..1382772
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AA seq
792 aa
AA seq
DB search
MSERLFSVALTSPPYATLTYALPAWLQDTALSPGTRVIVPLGAGTLRVGVVLGDDGNTVA
LPEGVTPKPLICPLDVEPCLNGDYLDMVRHLALRQGVTQGRILGNLLPAGLRTSKVRLRL
IDNGRKRLLKPRELAGLDKEVLQRLGQLWREGSFEVLVAGEDAAASEMCVLKADPPWPLR
PSAHRQAAILDFLYERGTTSRKVLTETLGTGCTTALGALLERGLVAIEAIDEASCACGIS
EASSTPLDAPQTLVLTEEQSAAVGNFAAAMDAEGPATWVLYGITGSGKTAVYLELAKMCL
ARGRSVLLLAPEVALACKLRRDVANSLPEAPVVLYHGYQTPAVREATFRLLATTRNQPRI
IVGTRSALFLPVQDIGAVVLDEEHDSSFKQDEGLNYQAKEVAWFRVGQSNGLLVLGSATP
DLKTWHAAREGVLPAARLTSRVGGGTLPSVELVDIRSLGPTDGILAPATTAALGATLAKG
EQAVILLNRRGYAPLMYCLDCGTVARCPHCDIGLTYHKGRERLVCHYCGHSVAYPAVCPN
CKGMHYLPMGEGTERLEESIASFLPPGGRVLRLDRDSTRRQGRMEEILAAFAREEAQVLV
GTQMLSKGHHFPKVTLAVVADGDLGLNLPDYRASERTFQLLVQSSGRAGRGELPGKVLIQ
TRDPGHYCWQYVLRGDYEAFFEHEIAIRQRRRYPPFVRLALVRMSYPVDCREGLAEVTSL
AGELRRMGSQEGVQVLGPAPAPLPLLRGRKRFNCLLKGADWLGLRRVYGAASGSVSHRHL
SLSLDLDPVNML
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacggttgttttccgtcgcgcttaccagcccgccttatgccaccctgacgtat
gcacttcccgcatggcttcaggacaccgcactctcaccgggaacgcgtgttatcgtgcct
cttggtgcaggaaccttgcgcgtcggtgtcgtgctgggcgatgacggcaatacggtcgct
cttcccgagggggtcacacccaaacccctcatctgtccgcttgacgtcgaaccgtgcctg
aacggggactatcttgacatggtgcgccatctggccttgcggcagggggtgacacagggg
cgtattctcggcaacctgcttcccgcagggctgcgtacgtcgaaggttcgtctgcgactc
atcgataacggtcgaaaacgcctgctgaagccgcgtgaacttgccggacttgataaagag
gttcttcagaggcttggacagctgtggcgcgaaggctctttcgaggtgcttgtcgccgga
gaggatgcggcagccagcgagatgtgcgtgctcaaggctgacccgccgtggccgctacgt
ccatcggcccatcggcaggcggctatccttgatttcctttacgaacgtggcacgacgagt
cgcaaggtgctcaccgaaacgctggggaccggctgtacgactgccctcggtgcgctcctt
gagcgaggacttgtcgctatcgaggccatcgacgaggcctcttgcgcgtgcggtatcagt
gaagcctcctcaacgcccctcgatgcgccgcaaacgctggtgcttacggaggaacagtcc
gccgcagtcggaaacttcgcagcggccatggatgcggaaggcccggccacgtgggtcctc
tacggcatcacgggcagcggcaagacggcagtctatctcgaactagccaagatgtgcctg
gccagagggcgcagtgtgctgctgctcgcaccggaagtcgcactggcatgcaagttgcgc
cgcgacgtggcgaacagcctgccagaggcgcctgtcgtgctgtaccatggctaccagaca
cctgccgtgcgtgaggctacgtttcgccttctggcgacgacccgaaatcaaccgcgcatc
atcgtgggaacccggtcggcattgttcttgccagttcaggatatcggggctgtcgtactc
gacgaggagcacgattcttcattcaagcaggatgaagggctcaactatcaggccaaggaa
gttgcgtggttcagggtagggcagtcgaacgggcttctggttttggggtctgccacgccg
gacctcaagacatggcatgcagcccgtgagggggtgcttcccgcagcccggcttacctcg
cgcgttggaggcggcaccctgccatccgtcgaactggtggacatccggtcgttggggccg
accgacggcatactcgcgccagcgaccacagccgcgctcggtgccacattggcaaaaggg
gagcaggcggtcattctcctgaacagaagaggatacgccccgctcatgtattgcctggac
tgcggcactgttgcgcgttgcccgcactgtgacatcggactcacgtatcacaagggccgc
gaacgtctggtctgccactattgcggccactccgtggcctatccggcagtctgtcccaat
tgcaaaggcatgcactacctgcccatgggggaagggacagagcgcctcgaggagtccatt
gcgtcctttttgccacccggcgggcgtgtgctgcgcctcgacagggacagcacgcgacgt
caggggcgcatggaggagattctcgcggccttcgcccgtgaagaggcacaagtgcttgta
gggacccagatgctgtcgaagggccatcattttcccaaggtcacgctggcggttgtcgca
gatggcgaccttggcctgaacctgccggactaccgggcatcagagcgtacattccagttg
ctcgtgcagtcatccgggcgggcaggtcgtggagagttgccgggcaaggtactcatccag
acaagagacccggggcattactgttggcagtatgtgcttcgtggcgactatgaagccttc
ttcgaacacgagattgccatccggcaacggcgacgctatcctccgttcgtcaggcttgcc
cttgtccggatgagctatcctgtagactgccgcgaaggccttgcagaagttacgtcattg
gctggtgaacttcgtcggatggggagtcaggaaggtgttcaggtgctgggccccgcacct
gcccccctccctctcctgcggggaagaaagcggttcaattgccttctcaaaggggcagac
tggctaggtttgcgccgtgtctacggtgcggcctctggcagtgtatcgcaccgccatctt
tcgctctcactggatctcgaccctgttaacatgctataa
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